Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq13338 95.1 1e-14 >seq13338 Length=646138 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 21488 CAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAAT 21547 |||| ||| | || || || || |||||||| ||| || || || |||||||| | Sbjct 454011 CAATTAAAAACCTCGTCTCTGCTGATTAATTCGTTACTGAACGTCAATCCGGGCATCAGA 454070 Query 21548 CCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACG 21607 || | || |||| ||||||||||||||| |||| || |||||||| ||||| || ||| Sbjct 454071 CCGCGTTTCTTTAGCCAAAATATTGACGCGAATGAACCGGAAAAGAAGATGCCTTCTACG 454130 Query 21608 GCAGCAAATGCAACTAATCGTTCACCG 21634 || ||||| || | | ||| || ||| Sbjct 454131 GCCGCAAAAGCGATGATTCGCTCGCCG 454157 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 21191 TAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATA 21250 || || | |||| |||| ||||| ||||| ||||| || ||||| |||||| |||||| Sbjct 453584 TATTCGCCAACTTTTTTCTCGAAGAAATTCGTCTTGCCCTCCAAAGATATATTCTCCATA 453643 Query 21251 AAATCAAATGGATTTTCA 21268 |||||||||||||||||| Sbjct 453644 AAATCAAATGGATTTTCA 453661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531802803926360