Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq13722 93.3 1e-13 seq13827 86.0 2e-11 >seq13722 Length=82832 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 111669 AAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACGGGATGCT 111727 |||||||| || || || ||||| | ||| || || ||||| || ||| || | Sbjct 63885 AAAATGGCTCTCCCTCCTTGTCA-CGTATTGGCTCAATTTTACGTCTCCGATGGCGAATT 63943 Query 111728 TTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGC 111787 || ||||| |||| |||||||| |||||||| || || || || || || || || || Sbjct 63944 ATCGTGCCAGCTGTACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATCGC 64003 Query 111788 AAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATT 111847 || ||| | || || || || | | ||||| | || ||| | || || || || || Sbjct 64004 TAGCTACTCCCTCCTCACCTGTATCCTGGCTCACGTGACTAATTTGAAGCCTGGAGACTT 64063 Query 111848 CATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAA 111902 |||||| | | || || |||||||||||| || || ||||||| ||||| Sbjct 64064 TATTCACACTTTAGGCGACGCGCATGTTTACTTGAATCATGTTGATGCGATTAAA 64118 >seq13827 Length=723868 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 363837 AGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCT 363896 |||||||||||| || ||||||||||| || |||||| | ||||| ||||| || | Sbjct 454333 AGGGGCGTTTGCGATTTATCTCGAGCCGTGGCACGCCGATGTGTTTGAATTTCTCGATTT 454392 Query 363897 CCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 || |||||||| ||||| || || || | || |||| || || |||||| | Sbjct 454393 GAAAAAGAACACGGGGAAAGAAGAGCGTCGAGCGAGGGAATTGTTTTACGCGCTTTGGAT 454452 Query 363957 TTCTGACCATTTTATGAAGCGCGTGGA 363983 | | || | ||| ||||| |||||||| Sbjct 454453 TCCGGATCTTTTCATGAAACGCGTGGA 454479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303107470225898