Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq13985 102 2e-16
seq14242 100 6e-16
seq14215 98.7 2e-15
seq13254 95.1 2e-14
>seq13985
Length=15832
Score = 102 bits (112), Expect = 2e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||
Sbjct 12837 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 12778
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 12777 GCCCCACGTTGGGC 12764
Score = 98.7 bits (108), Expect = 2e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||| || |||||||||||||||||| | ||||||||||||| | ||||||||||||||
Sbjct 13294 TAGCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 13353
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 13354 GCCCCACGTTGGGC 13367
>seq14242
Length=57729
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||
Sbjct 27936 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 27877
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 27876 CCCCACGTTGGGC 27864
>seq14215
Length=63435
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||||
Sbjct 53065 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 53124
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 53125 CCCACGTTGGGC 53136
>seq13254
Length=200242
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| || |||||||||||||||||| | ||||||||||||| | ||||||||||||||||
Sbjct 31119 GCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 31060
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 31059 CCCACGTTGGGC 31048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027642699765499
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |