Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq12471 152 4e-32
seq13894 111 1e-19
seq12614 86.0 5e-12
>seq12471
Length=105862
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| || || || |||||||| || || | ||| || || ||||| |||||||||||||||
Sbjct 72141 CCACCGCGAAGCCTCAAAACCAAGTGGAGCGTGGACTCCTTTTGGATGTTGTAATCGCTC 72200
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || ||| ||| || |||||||||||||| |||| | ||||||||||| || |||
Sbjct 72201 AATGTGCGACCATCCTCGAGTTGTTTACCAGCAAAGATCAATCGCTGTTGGTCGGGCGGA 72260
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || |||||||| ||||| || | | ||||| |||||| | | |||||
Sbjct 72261 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTTGGCTCGACT 72320
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | || ||||| ||||| ||||| ||||| ||||||||
Sbjct 72321 TCCAATGTGATGGTCTTGCCAGTCAGGGTTTTGACAAAGATCTGCAT 72367
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 114171 AAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCT 114230
||||| ||||| | ||| |||||||| ||||||||||||||||| | || ||| ||||
Sbjct 72901 AAAACCAAATGAAGCGTTGATTCTTTCTGAATGTTGTAATCGCTAAGTGTGCGACCATCT 72960
Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290
|| |||||||| ||||| |||| ||||||||||| || || || || |||||||||||
Sbjct 72961 TCGAGTTGTTTCCCAGCAAAGATTAGACGCTGTTGATCTGGTGGGATCCCTTCTTTGTCT 73020
Query 114291 GCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350
||||| ||| | | ||| | ||||| | | ||||| |||| || | ||
Sbjct 73021 TGGATCTTGGCTTTGACATTTTCGATAGTGTCACTAGGCTCGACTTCCAACGTGATGGTC 73080
Query 114351 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| ||||| ||||| || || || |||||
Sbjct 73081 TTGCCAGTCAGGGTTTTGACGAAGATTTGCAT 73112
Score = 143 bits (158), Expect = 2e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| |||||||| ||||||||||| ||||||| ||| ||| |||||| | |||||||||
Sbjct 73434 GTTGATTCTTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCTTCCAATTGTTTACCG 73493
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | ||||||||| || |||||||| ||||||||||| ||||| |||
Sbjct 73494 GCGAAGATCAAACGCTGTTGATCTGGAGGAATCCCTTCTTTGTCTTGGATCTTGGCTTTC 73553
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| || | | ||||| |||| ||| | ||||| || || || |||
Sbjct 73554 ACATTCTCAATGGTATCACTTGGCTCGACTTCCAAGGTAATGGTTTTTCCAGTGAGTGTT 73613
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 73614 TTGACGAAGATCTGCAT 73630
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|||||||| | | || | || || || | ||| |||||||| || ||||||||||||
Sbjct 73111 ATACCGCCTCTCAACCTGAGCACCAAGTGAAGCGTCGATTCTTTCTGGATGTTGTAATCG 73170
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| | || || |||||| | |||||| |||||| | || | ||||||||| ||||||
Sbjct 73171 CTGAGTGTGCGTCCATCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGTTGATCCGGA 73230
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||||||||| |||||| ||||| | || | |||||| | | ||
Sbjct 73231 GGAATCCCTTCTTTGTCTTGAATCTTGGCTTTTACATTCTCGATAGTGTCGCTTGGCTCA 73290
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||||| || || || ||||| ||||||||||||||
Sbjct 73291 ACTTCGAGCGTAATAGTTTTTCCAGTGAGGGTTTTGACAAAAATCTGCAT 73340
Score = 120 bits (132), Expect = 3e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| ||||| | || ||||| ||||| |||||||||||||||| |||||| ||||||
Sbjct 72614 AACCAAATGCAGAGTGGATTCCTTTTGGATGTTGTAATCGCTCAATGTACGACCATCTTC 72673
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
| |||||| |||||| | || | ||||||||| |||||||| || || ||||| ||
Sbjct 72674 CAATTGTTTTCCAGCGAAAATCAAACGCTGTTGATCCGGAGGGATCCCCTCTTTATCTTG 72733
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
||||| ||| | | ||| | ||||| | | ||| || || | || | || ||
Sbjct 72734 GATCTTGGCTTTGACATTTTCGATCGTGTCACTAGGTTCAACCTCTAAAGTGATGGTCTT 72793
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||| |||| || || || || || ||||||
Sbjct 72794 GCCAGTCAAGGTCTTAACGAAGATTTGCATG 72824
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227
||||| || ||||| | || |||||||| || |||||||| ||||| | || ||
Sbjct 73644 CTCAATACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGCTAAGTGTGCGGCCG 73703
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
||||| || || || |||||| | || | |||||||| || |||||||| ||||| ||
Sbjct 73704 TCTTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGATCGGGAGGAATTCCTTCCTTA 73763
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| |||||| || | | || | |||||| | | || || |||| || |
Sbjct 73764 TCCTGAATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCCACCTCCAAAGTAATA 73823
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||||| || || || ||||| |||||||||||||||
Sbjct 73824 GTTTTTCCAGTGAGGGTTTTAACAAAAATCTGCATG 73859
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|||||||| | | || | || || || | || |||||||| ||||||||||| |||
Sbjct 72366 ATACCGCCTCTCAACCTGAGCACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCG 72425
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| | ||| || ||| || | |||||||| || | || ||||||||||| || ||
Sbjct 72426 CTTAAAGTGCGGCCATCCTCCAACTGTTTACCGGCAAAAATCAGACGCTGTTGATCGGGT 72485
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || ||| || ||||| | || | |||||| | | ||
Sbjct 72486 GGGATTCCTTCCTTATCTTGAATTTTAGCTTTTACATTCTCGATCGTGTCGCTTGGCTCA 72545
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || || || |||||||| ||||| ||||||||
Sbjct 72546 ACTTCGAGAGTAATGGTCTTTCCAGTAAGAGTTTTGACAAAGATCTGCAT 72595
>seq13894
Length=1211295
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226
|| |||||| ||||| | || ||||| || || |||||||||||| || || ||
Sbjct 231501 TCGCAAAACCAAATGCAGAGTCGATTCCTTCTGGATGTTGTAATCGGACAAGGTTCGGCC 231560
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
|||||| | ||| || || || | || | ||| |||||||| || || |||||||||||
Sbjct 231561 ATCTTCCAATTGCTTTCCCGCAAAAATTAAACGTTGTTGGTCGGGTGGGATGCCTTCTTT 231620
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| || || || | | |||| |||||| | | |||||| || | ||| |
Sbjct 231621 GTCCTGGATTTTCGCCTTGACATTCTCAATGGTGTCCGATGGTTCGACTTCGAGGGTAAT 231680
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || ||||| | |||||| || |||||||||||
Sbjct 231681 GGTCTTTCCGGTTAAAGTTTTCACGAAAATCTGCAT 231716
Score = 107 bits (118), Expect = 2e-18
Identities = 163/231 (71%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTT-TGAATGTTGTAATC 114211
|||||||| | | | || || | ||| | || ||||| ||| || |||||||||||
Sbjct 231715 ATACCGCCTCTCAAACGCAGCACAAGATGAAGGGTCGATTCCTTTCTGGATGTTGTAATC 231774
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
|| || || |||||| ||||||||||| || |||| | |||||| || |||||
Sbjct 231775 TGACAAGGTTCGGCCATCTTCCAGTTGTTTACCGGCAAAGATCAAACGCTGCTGATCCGG 231834
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
|||||||||||||||||| || || || | | ||| | || |||| | |||
Sbjct 231835 AGGAATGCCTTCTTTGTCTTGGATTTTCGCCTTCACGTTTTCGATTGTATCGGAAGGTTC 231894
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||| || | || | || || || || | |||||| || |||||||||||
Sbjct 231895 GACTTCAAGCGTGATGGTCTTCCCAGTTAAAGTTTTCACGAAAATCTGCAT 231945
Score = 98.7 bits (108), Expect = 8e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||||||| || || || |||||| | ||| || ||
Sbjct 231977 GTTGACTCTTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCTTCCAATTGCTTTCCC 232036
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | || || || || || || ||||| |||||||| || ||| | ||
Sbjct 232037 GCGAAGATCAATCGTTGCTGATCTGGTGGGATGCCCTCTTTGTCTTGGAT-TTTCGCCTT 232095
Query 114306 AGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364
| | | ||||| |||||| | | |||||| |||| || | ||||| || || | ||
Sbjct 232096 AACGTTTTCAATGGTGTCTGATGGTTCGACTTCCAAAGTGATGGTTTTTCCAGTTAAGGT 232155
Query 114365 TTTTACAAAAATCTGCAT 114382
||| ||||||||||||||
Sbjct 232156 TTTCACAAAAATCTGCAT 232173
>seq12614
Length=760689
Score = 86.0 bits (94), Expect = 5e-12
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || ||||| || | ||| | ||| || || || |||||||| || |||
Sbjct 131134 ACCACCACGGAGCCTCAACACAAGATGCAACGTCGACTCCTTCTGAATGTTATAGTCGGA 131193
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||||| ||||||||| ||||| ||||| | || | || ||||| ||||||||
Sbjct 131194 CAACGTACGTCCATCTTCAAGCTGTTTTCCAGCAAAAATCAATCGTTGTTGATCCGGAGG 131253
Query 114275 AATGCCT 114281
||| |||
Sbjct 131254 AATTCCT 131260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420058930601268
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