Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq13235 167 9e-36
seq12471 120 1e-21
seq13894 116 1e-20
seq12614 86.0 2e-11
seq12177 86.0 2e-11
seq7061 84.2 9e-11
seq4564 84.2 9e-11
>seq13235
Length=296648
Score = 167 bits (184), Expect = 9e-36
Identities = 702/1088 (65%), Gaps = 38/1088 (3%)
Strand=Plus/Plus
Query 451200 CCTATATTCAAG-TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCA 451258
|||| | ||||| | | || ||||| |||| || || ||| || |||||||| ||
Sbjct 65839 CCTAAAATCAAGGTCGAATACAAAGGCGAAATGAAGACCTTTTTCCCCGAAGAAATCTCC 65898
Query 451259 TCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACT 451318
|| |||||| | || |||||||| ||||| || ||| || | || | || | |
Sbjct 65899 TCCATGGTTTTAACCAAAATGAAGGAAACCGCCGAAGCTTACTTAGGCAAAACTGTAAAT 65958
Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378
||||||| | ||||| || ||||| || || ||| | ||||| ||||| || || |||
Sbjct 65959 AATGCAGTCGTCACTGTCCCAGCTTACTTTAACGATTCCCAACGCCAAGCCACCAAGGAT 66018
Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438
|| || ||||||||||| ||||| ||||| || || || || || ||||| ||||||
Sbjct 66019 GCCGGCACCATTGCTGGTTTGAATGTGCTTCGCATCATCAACGAGCCCACAGCCGCTGCT 66078
Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGAT 451498
| || || ||||| ||| || || | | ||| ||| | | | || |||
Sbjct 66079 ATTGCTTACGGACT-GGACAA--GAAGGTTGGTGGAGAGCGAAACGTGCTCATTTTCGAT 66135
Query 451499 TTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558
|| || || || || ||| || | | | |||||||| || | |||||||||
Sbjct 66136 TTGGGCGGTGGTACCTTCGATGTGTCGATTTTGACCATTGAAGACGGCATTTTTGAAGTA 66195
Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGA- 451617
|| | ||| ||| ||||| ||| | || || |||||| | ||||| ||| || |
Sbjct 66196 AAATCGACCGCTGGAGATACCCATTTGGGCGGAGAAGATTTCGATAACCGAATGGTCAAC 66255
Query 451618 -ATGGTTGAAAACTGATGTTCAA-CGAAAACTAAAAGTAGATATTTCTACTAACCAAAAA 451675
|| ||| | | || |||||| |||||| ||| ||| | || ||||| ||
Sbjct 66256 CAT-TTTGTACA-AGA-GTTCAAGAGAAAACACAAAAAGGATTTGACTTCTAACAAACGC 66312
Query 451676 GCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAA-----TTA-CACTCAGTTCA 451729
|| | || | |||| |||| || ||| || || | ||| || ||||
Sbjct 66313 GCCGTGAGGAGACTTAGAACAGCATGCGAACGTGCGAAGAGGACCTTATCATCCAGT--- 66369
Query 451730 ACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACT 451789
|| ||| | || || | |||||| || | || || | || | | || |
Sbjct 66370 ACTCAA---GCGAGCATCGAGATTGATTCCCTATTCGAAGGCGTCGACTTTTACACGTCG 66426
Query 451790 CTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATT-TTTGCACGGGTAATGAAACC 451848
||||||| |||| |||||| |||| | | || ||| | | || | ||
Sbjct 66427 ATTACCCGAGCTAGGTTTGAA-GAATTGAACGCCGACTTGTTTCGATCAACACTGGACCC 66485
Query 451849 TGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCT 451908
||||| | | |||| ||| | || | ||||| | || || | || ||||| ||
Sbjct 66486 CGTTGAGAAGGCCTTACGCGATGCAAAGCTGGATAAAGCTCAAGTTCACGACATTGTTCT 66545
Query 451909 TGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTC----TTATTTTG 451964
||| |||||||| || |||||||| ||||| ||| | || |||| || ||||
Sbjct 66546 TGTTGGAGGTTCAACCCGAATTCCCAAAATCCAAAAACTG----CTTCAAGATTTTTTTA 66601
Query 451965 GAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAG 452024
|| ||| || || || ||| | || || |||||||| ||||| || || ||||| |
Sbjct 66602 ATGGCAAAGAATTAAACAAAAGCATCAACCCAGATGAAGCAGTTGCTTACGGCGCTGCTG 66661
Query 452025 TTCAAGCAGC--TATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGT 452082
| ||||| || |||| | | | | || |||| | | ||| | |||| |
Sbjct 66662 TGCAAGCCGCGATATTGCATGGCGAT-AAAT-CTGAAGCAGTCCAGGATTTGTTGTTGCT 66719
Query 452083 AGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAAT 452142
||||| |||| || || || || ||||||| || |||||| | ||||| || ||
Sbjct 66720 CGATGTTGCACCGCTGTCCCTCGGCATTGAAACTGCCGGTGGAGTCATGACGGTGTTGAT 66779
Query 452143 TAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAA 452202
|| || || ||||||| ||| | | ||||||||| | || || ||
Sbjct 66780 CAAGCGCAACACCACTATTCCAACCAAACAAACTCAAACATTCACCACTTATTCGGACAA 66839
Query 452203 CCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAA--T 452260
|||||| || || |||||||| | ||||||||| ||||| ||||| ||| || |
Sbjct 66840 CCAACCCGGAGTTTTGATTCAAGTCTATGAAGGAGAGCGTGCCATGACCAAAGACAATGT 66899
Query 452261 AATAAACT 452268
|| |||||
Sbjct 66900 AAGAAACT 66907
Score = 116 bits (128), Expect = 1e-20
Identities = 134/178 (75%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 452314 TCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGT 452373
||||||||||||| |||| | || | ||||| |||||||| | || ||| ||||||
Sbjct 67025 TCCTCAAATTGAAGTTACGTTCGACATCGATGCTAATGGTATCTTGAACGTGTCTGCAGT 67084
Query 452374 TGA-AAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTAT 452432
||| || | || | |||||| | | ||||| || ||||| || ||||| ||| ||
Sbjct 67085 TGATAAGAGCA-CCGGAAAAGAAAACAAAATCACGATTACCAACGATAAGGGCCGATTGA 67143
Query 452433 CTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490
|||||||| |||||| ||||||| | ||||| || |||| ||||| |||||||||
Sbjct 67144 GCAAAGAAGAAATTGAACGAATGGTACAGGAAGCCGATAAATACAAGGCTGATGATGA 67201
>seq12471
Length=105862
Score = 120 bits (132), Expect = 1e-21
Identities = 161/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || ||||| || ||||| ||||||||||| || || ||||| ||
Sbjct 73340 ATGCAGATTTTTGTCAAAACCCTCACTGGAAAAACTATTACGCTCGAAGTTGAGCCAAGC 73281
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | | ||| || |||||||| || ||||| |||||||| ||||||
Sbjct 73280 GACACTATCGAGAATGTAAAAGCCAAGATTCAAGACAAAGAAGGGATTCCTCCGGATCAA 73221
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||||| |||||| | || |||||| | ||||||||| | || | ||||| ||
Sbjct 73220 CAGCGTTTGATTTTCGCTGGAAAACAATTGGAAGATGGACGCACACTCAGCGATTACAAC 73161
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | || || | || |||||||| || | || |||||||
Sbjct 73160 ATCCAGAAAGAATCGACGCTTCACTTGGTGCTCAGGTTGAGAGG 73117
Score = 107 bits (118), Expect = 8e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || ||||| || ||||| || || |||||||| || ||||| ||
Sbjct 72595 ATGCAGATCTTTGTCAAAACTCTTACTGGAAAGACCATTACTCTCGAAGTTGAGCCAAGC 72536
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | | ||| ||||||||||||||||||||||| || || ||||||
Sbjct 72535 GACACGATCGAGAATGTAAAAGCTAAAATTCAAGATAAGGAAGGAATCCCACCCGATCAA 72476
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | ||||| | || ||||| | || ||||| | ||||| || || ||
Sbjct 72475 CAGCGTCTGATTTTTGCCGGTAAACAGTTGGAGGATGGCCGCACTTTAAGCGACTACAAC 72416
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | || || | || |||||||| || | || |||||||
Sbjct 72415 ATTCAGAAAGAATCCACCCTTCACTTGGTGCTCAGGTTGAGAGG 72372
Score = 96.9 bits (106), Expect = 1e-14
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|| ||| | ||||| |||||||| || ||||| |||||||||||| | || || || ||
Sbjct 73861 ATCATGCAGATTTTTGTTAAAACCCTCACTGGAAAAACTATTACTTTGGAGGTGGAGCCA 73802
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
|| | || || | || || ||||| |||||||||||||||||||| |||
Sbjct 73801 AGCGACACGATCGAGAACGTGAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCCGAT 73742
Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207
||||| || || |||||| | || || || || ||||| ||
Sbjct 73741 CAACAGCGATTGATTTTCGCTGGAAAGCAGCTCGAAGACGG 73701
Score = 95.1 bits (104), Expect = 5e-14
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| |||||||| || || || || | || || || | |
Sbjct 73112 ATGCAAATCTTCGTCAAAACCCTGACTGGCAAGACCATCACGTTGGAAGTCGAGCCTAGT 73053
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| | | ||| || || ||||| || ||||| || || || ||||||
Sbjct 73052 GACACTATCGAAAATGTCAAAGCCAAGATCCAAGACAAAGAAGGGATCCCACCAGATCAA 72993
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAAC-TTTGGCGGATTATAA 391228
|| ||| |||| || | ||||||||||| |||||||| | || || || ||||| ||
Sbjct 72992 CAGCGTCTAATCTTTGCTGGGAAACAACTCGAAGATGGTCGCACACTTAGC-GATTACAA 72934
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTA 391262
||| | || || |||| ||||| || || |||
Sbjct 72933 CATTCAGAAAGAATCAACGCTTCATTTGGTTTTA 72900
>seq13894
Length=1211295
Score = 116 bits (128), Expect = 1e-20
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| | || || || || ||||| || || || ||| ||||
Sbjct 231716 ATGCAGATTTTCGTGAAAACTTTAACCGGAAAGACCATTACCCTCGAAGTCGAACCATCG 231657
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | || ||||| || || || ||||| || || || || |||
Sbjct 231656 GACACCATTGAGAATGTCAAGGCGAAAATCCAGGACAAAGAAGGCATCCCACCCGACCAA 231597
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||||||||| | || || ||| | |||||||| |||| ||| | ||||| ||
Sbjct 231596 CAACGTTTAATTTTTGCGGGAAAGCAATTGGAAGATGGCCGAACCTTGTCCGATTACAAC 231537
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
|| | ||||| | || || || || || || || |||||||
Sbjct 231536 ATCCAGAAGGAATCGACTCTGCATTTGGTTTTGCGATTGAGAGG 231493
>seq12614
Length=760689
Score = 86.0 bits (94), Expect = 2e-11
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 391151 AGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAG 391210
|||||||||||| ||||||||||| || ||||| | || ||||| |||||||||||| |
Sbjct 131260 AGGAATTCCTCCGGATCAACAACGATTGATTTTTGCTGGAAAACAGCTTGAAGATGGACG 131201
Query 391211 AACTTTGGCGGATTATAATATTGATAAGGA 391240
|| ||| | || ||||| ||| | |||||
Sbjct 131200 TACGTTGTCCGACTATAACATTCAGAAGGA 131171
>seq12177
Length=61224
Score = 86.0 bits (94), Expect = 2e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 391151 AGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAG 391210
||||||||| || || ||||| || || ||||| | ||||||||| | |||||||||||
Sbjct 22543 AGGAATTCCGCCCGACCAACAGCGATTGATTTTTGCCGGGAAACAATTGGAAGATGGAAG 22602
Query 391211 AACTTTGGCGGATTATAATATT 391232
|||||| |||||||||| |||
Sbjct 22603 AACTTTATCGGATTATAACATT 22624
>seq7061
Length=6671
Score = 84.2 bits (92), Expect = 9e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115
|| || |||||||| | || || ||| | || || | ||| || || |||| |
Sbjct 2769 ATCTTTGTTAAAACTTTAACGGGGAAATCCATAACGATAGATTGCGAGCATTCGGATACC 2828
Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175
|| || ||| ||| |||| ||||||||||| |||||||| | || || || ||| |
Sbjct 2829 ATCAAATATATCAAAGAAAAGATTCAAGATAAAGAAGGAATAGCACCGGACCAGCAAAGA 2888
Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235
||||| || | || ||||| | ||||||| || | | | | ||||| ||||| |
Sbjct 2889 TTAATCTTTGCTGGTAAACAGTTAGAAGATGAAAAACGTCTCGAAGATTACAATATACAG 2948
Query 391236 AAGGATGCAACACTT--CACTTAGTATTAAGA 391265
|| || ||||||| || ||||||||||||
Sbjct 2949 AAAGA--AAACACTTTACATTTAGTATTAAGA 2978
>seq4564
Length=627493
Score = 84.2 bits (92), Expect = 9e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426
|| || |||||||| || || ||||| || |||||||| | ||| | |||||||||||
Sbjct 243589 GCTACCAAAGATGCTGGTCAGATTGCAGGATTAAATGTATTACGAGTAATTAATGAACCG 243648
Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCA 451462
|||||||| ||||| || |||||| | | ||||||
Sbjct 243649 ACAGCAGCGGCTCTTGCTTATGGAATGGACAAATCA 243684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975345298545812
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