Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq13151 356 3e-93
seq13235 325 5e-84
seq14046 89.7 7e-13
seq10189 84.2 3e-11
>seq13151
Length=83164
Score = 356 bits (394), Expect = 3e-93
Identities = 1038/1581 (66%), Gaps = 33/1581 (2%)
Strand=Plus/Minus
Query 6583 ATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATC 6642
|||||| ||||| || | |||||| || || || | ||||||| | || |||||
Sbjct 74380 ATACTTCTCCGCGTCCTTAACCATCCGCTCTATCTCATTCCTCGATAACCGTCCTTTATC 74321
Query 6643 ATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702
|| || || || || |||||||| || | | || || | ||||||||
Sbjct 74320 GTTGGTTATAACGATTTTACTCGATTTACCGGAACTCGTCTCGGTCGCTGTAACATTCAA 74261
Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762
||| ||||| ||||| | |||||| || | |||||| || | || | ||| || |
Sbjct 74260 AATTCCATTCGCATCGATATCGAATGCGACTTCAATTTGCGGGATCCCGCGCGGCGCAGG 74201
Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822
|||| ||| | || || || || | |||| | |||| ||| | | | | ||
Sbjct 74200 CGGAAGTCCCATCAATTCGAACCGTCCTAATAAATTATTATTACTCGTCATGCTTCTCTC 74141
Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882
||||| || || | | || ||| | ||||| || || ||| | ||| || |
Sbjct 74140 GCCTTCGTACACCTGTACCGTGACCCCCGGTTGGTTGTCGGCGTACGTCGTGAACATGTT 74081
Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCG-GAATAACCGGGGTCATAATACCACCCA 6941
| | || | |||||| || ||||| || ||| | |||| || || |||
Sbjct 74080 TGACGTTTTGAACGGAATCCGGGTGTTTCTTTCGACTAATTTCG-TCATTATTCCGCCCG 74022
Query 6942 TAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATT 7001
||||||| ||| || || | || | || || | |||||| | ||| || | ||
Sbjct 74021 CGGTTTCGATTCCGAGTGATAATGGAGCAACATCGACGAGTAAAACGTCCTGGATGTTTT 73962
Query 7002 CGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061
|| | || |||| || ||||| ||||| || | || ||| | || || || || |
Sbjct 73961 CGCTTTTGTCTCCCGATATAATGGCCGCTTGAACAGCAGCGCCGAACGCCACAGCTTCGT 73902
Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAA 7121
||||||| || | | || ||||| || || | || |||| | | || || |
Sbjct 73901 CGGGGTTGATACTCATGTTGAGTTCCTTCCCTTCGAAGAAATCTTGGAGTAATTTCTGTA 73842
Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGA 7181
|||||| || || ||||| || ||||||||||||| || ||||| || ||||| | ||
Sbjct 73841 CTTTCGGAATCCGAGTCGAACCGCCGACCAAAACGACATCGTTCACGTTGGATTTCTTGA 73782
Query 7182 TCTTTGAGTC-TCGAAGTGTTTTTTCGACAGGTTCCATAC---ATTTACGGAACAAGTCC 7237
|| | ||| | ||| | || || ||| ||| | |||| ||| || ||
Sbjct 73781 GTTTCGCGTCGTTCAAG-GCCCGATCCACGGGTCCCAGAGTCGATTT---GAATAAATCG 73726
Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297
|| || | ||| || || | || | | || | ||| |||||||| ||||||
Sbjct 73725 ATGCATAATTCTTCGAATCTGGCTCTCGACATTTTCGAATAAAAATCAACTCCGTCGAGC 73666
Query 7298 AACGAATCAATTTCAATGGTTGTTT--GTGCCG-TCGAAGATAACGTTCGCTTTGCGCGC 7354
|||| || | ||| || | || || |||| | |||| ||| | || || || |
Sbjct 73665 AACGCGTCCAATTCGATCGATGCTTCGGTGCTGCTCGA---TAAAATCCGTTTGGCTCTT 73609
Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414
|| ||||| |||| ||| || | | || ||||| || ||||| | ||| || || | |
Sbjct 73608 TCGCACGCGGTTCTTAACCGTCTCAAAGCTCGCGGATTCCCGGATAAATCCTTTTTGTAT 73549
Query 7415 TTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCC 7474
|| | || || || ||| || | | || |||||||||||| || |||
Sbjct 73548 TTCCTACGGAATTCCTCGACGAAATGCGTCACCATTCGATTATCGAAATCTTCGCCGCCC 73489
Query 7475 AAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA---ATGTTTAAC 7531
|| || ||||| ||||| || | || |||||||| || | |||||| ||| ||||
Sbjct 73488 AAATGCGTATCACCCGCTGTGGATTGAACTTCAAACATGGCGCCTTCATCGATGGTTAAA 73429
Query 7532 AACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT 7591
| ||| || || || || ||||| || | || || || | ||| || | ||| ||
Sbjct 73428 ATCGACACGTCGAATGTCCCACCGCCTAAATCGAATATCAAAACG---GTTTTTTCGCCT 73372
Query 7592 TTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648
|| |||||||| | ||||| || | ||||| || || || || ||||| || |||
Sbjct 73371 TTCAGATTCTTATCCAATCCGTAGGCCAACGCCGCAGCTGTCGGCTCGTTAATTATTCGA 73312
Query 7649 AG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707
| ||| |||| || ||||| | |||||||||| ||||||||||||||||| |||||
Sbjct 73311 ATTACA-TTCAATCCTGCAATGGCGCCCGCATCTTTGGTCGCTTGTCGTTGCGAGTCGTT 73253
Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767
|| || ||||| || |||| ||||| || | ||||| || | ||| | ||| ||
Sbjct 73252 GAAATACGCCGGAACAGTTATCACCGCATCTTTCACTTTAAGGCCTAAATAAGCTTCGGC 73193
Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827
| || ||||||||| | ||||||||| || ||||| | | || |||
Sbjct 73192 TGTTTCCTTCATTTTGACTAAAACCATCGAACTGATTTCTTCCGGGGAGAATAATTTGTC 73133
Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887
||| || || | | |||| || ||| ||||| |||| | | ||| ||| | |
Sbjct 73132 TTCGCCTTTGTATTTCACTTTAAACATCGGTTT-GCCGCCGATAC--TGATCACCGTGAA 73076
Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947
|| ||| | |||| || |||| || ||| ||| | |||||||| || || ||
Sbjct 73075 CGGCCATTGCTTCAAGTCTTCTTTGATCTGCGAGTCGTCGTATTTTCTTCCTATTAGTCG 73016
Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007
|| || || |||| ||||||| ||||||||| | |||||||||| || || || ||
Sbjct 73015 TTTCGCGTCGAAAAGGGTGTTTTCGGGGTTCATCGACATTTGGTTCTTGGCTGCTTCGCC 72956
Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067
||| || ||||| | || || || |||||||| ||||| ||||| || |||||
Sbjct 72955 GATTAGTCGTTC---GGTGTCGGTGAAGGCGACGTAGCTGGGGGTTGTTCGGTTGCCTTG 72899
Query 8068 GTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGT 8127
|||||| || || || || || ||| ||| | ||||| |||||||| || |||||
Sbjct 72898 GTCGTTGGCGATGATCTCGACTTTTCCGTGTTGAAATACGCCCACGCACGAGTAGGTTGT 72839
Query 8128 TCCTAAATCAATACCGATTGC 8148
||||||||||| || || ||
Sbjct 72838 GCCTAAATCAATGCCTATGGC 72818
>seq13235
Length=296648
Score = 325 bits (360), Expect = 5e-84
Identities = 645/942 (68%), Gaps = 11/942 (1%)
Strand=Plus/Minus
Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078
|| || |||||||| || | || ||||| || || || ||||| ||||| || ||||
Sbjct 66677 AATATCGCGGCTTGCACAGCAGCGCCGTAAGCAACTGCTTCATCTGGGTTGATGCTTTTG 66618
Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138
|| | |||||| || |||||| |||| | || || ||| ||||| || ||||| ||
Sbjct 66617 TTTAATTCTTTGCCATTAAAAAAATCTTGAAGCAGTTTTTGGATTTTGGGAATTCGGGTT 66558
Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198
|| || || || | ||| || || | |||| | |||||| | ||||| || || |
Sbjct 66557 GAACCTCCAACAAGAACAATGTCGTGAACTTGAGCTTTATCCAGCTTTGCATCGCGTAAG 66498
Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258
| || || || || |||| | || |||||||| || ||| ||||| |
Sbjct 66497 GCCTTCTCAACGGGGTCCAGTGTTGATCGAAACAAGTCGGCGTTCAATTCTTCAAACCTA 66438
Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318
|| |||||||| || || || || || ||||| ||| ||| |||||||| || ||| |
Sbjct 66437 GCTCGGGTAATCGACGTGTAAAAGTCGACGCCTTCGAATAGGGAATCAATCTCGATGCTC 66378
Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378
| ||| | | || ||||| || | ||| || || || || || |||| | | |
Sbjct 66377 GCTTGAGTACTGGATGATAAGGTCCTCTTCGCACGTTCGCATGCTGTTCTAAGTCTCCTC 66318
Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAA 7437
| ||| || |||| | | ||| || || ||||| | || ||||||| | | ||
Sbjct 66317 ACGGCGCGTTTGTTAGAAGTCAAATCCTTTTTGTGTTTTCTCTTGAACTCTTGTACAAAA 66258
Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497
|| || | || |||||||||||| || ||||| || ||||| || |||||||
Sbjct 66257 TGGTTGACC-ATTCGGTTATCGAAATCTTCTCCGCCCAAATGGGTATCTCCAGCGGTCGA 66199
Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557
||| |||||||| || || |||||||| | || | ||| ||||| || |||||||| ||
Sbjct 66198 TTTTACTTCAAAAATGCCGTCTTCAATGGTCAAAATCGACACATCGAAGGTACCACCGCC 66139
Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617
|| || |||||||| ||||| || | | ||||| || || ||||| || ||
Sbjct 66138 CAAATCGAAAATGAGCACGTTTCGCTCTCCACCAACCTTCTTGTCCAGTCCGTAAGCAAT 66079
Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCG 7676
||| || || || || || || || || ||||| ||| |||| |||||||| || | |
Sbjct 66078 AGCAGCGGCTGTGGGCTCGTTGATGATGCGAAGCACA-TTCAAACCAGCAATGGTGCCGG 66020
Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736
|||| || || ||||| ||||| |||||||||||||| || ||||| || ||||| || |
Sbjct 66019 CATCCTTGGTGGCTTGGCGTTGGGAATCGTTAAAGTAAGCTGGGACAGTGACGACTGCAT 65960
Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796
| || | || || | || | ||| ||| | || ||||||||||| | |||||| |
Sbjct 65959 TATTTACAGTTTTGCCTAAGTAAGCTTCGGCGGTTTCCTTCATTTTGGTTAAAACCATGG 65900
Query 7797 ATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855
| || || ||||| | | ||| || ||| |||| || || | || || | || |
Sbjct 65899 AGGAGATTTCTTC-GGGGAAAAAGGTCTTCATTTCGCCTTTGTATTCGACCTTGATTTTA 65841
Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915
||||| |||| || || ||| || | | | | ||||| |||||| || ||| | |
Sbjct 65840 GGTTT-GCCGC--CATCGCTGATGACATCAAATGGCCAATGTTTCATGTCAGATTGCA-C 65785
Query 7916 TGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATC 7956
|| | ||| ||| || | ||||| ||||| || || ||
Sbjct 65784 TGACGAATCCTCAAATTTACGACCGATCAGACGTTTAGCGTC 65743
>seq14046
Length=357214
Score = 89.7 bits (98), Expect = 7e-13
Identities = 168/245 (69%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 6587 TTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTC 6646
|| ||||| || | || ||| ||||||||||||| | | ||| || || ||
Sbjct 8720 TTCTCCGCTTCATTGATCATTCTTTCAATGTCTTCGGGAGTAAGTCTGTTCTGGTCGTTT 8779
Query 6647 GTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATA 6706
||||| || ||||| || || || | | | |||||||||||| ||| |||||||
Sbjct 8780 GTAATTGTGATCTTCTCTTTGTTTCCGGTGCCTTTATCTTCAGCAGATACTCTCAAAATG 8839
Query 6707 CCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCG--GCTG 6764
|| ||| |||||| || || | || | ||||||| | || || ||| ||| | |
Sbjct 8840 CCGTTTACATCAATCTCAAAAGTGACCTCGATTTGTG--GAACTCCACGGGGCGCCGGAG 8897
Query 6765 GAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCAC 6824
|||| || ||||| || ||| | || | |||| |||||| | | | | ||||||||
Sbjct 8898 GAATTCCAGTTAAGTCGAATTTGCCCAATAAATGGTTATCTTTAGTCATGGGACGTTCAC 8957
Query 6825 CTTCA 6829
|||||
Sbjct 8958 CTTCA 8962
>seq10189
Length=230568
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508
|||||||| ||||||||||| || ||||| |||||||||||||||| ||||| || ||
Sbjct 42866 TTACCAATAGCATCAATTTCGTCCATAAAAATAATACACGGTTGATGATCACGAGCGAAA 42807
Query 11509 TCAAATATATCACGGA 11524
| ||| || |||||||
Sbjct 42806 TTAAACATTTCACGGA 42791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635015784720760
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