Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq13941 98.7 1e-15 seq12995 89.7 6e-13 seq13338 87.8 2e-12 >seq13941 Length=98454 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/126 (78%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || ||||||||||| || || ||||| ||||| | ||||| |||| Sbjct 98381 CTTCATCTCTGCTGATCAATTCATTGCTGAACGTCAATCCAGGCATGAGACCTC-GTTTT 98323 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | |||||||| || | || ||||| || || || ||||| |||||||| || || || | Sbjct 98322 TCATCCAAAAAATCGACGCGAAAGACCCCGAGAAAAAAATCCCTTCAACCGCCGCGAAAG 98263 Query 37318 CTACAA 37323 |||||| Sbjct 98262 CTACAA 98257 >seq12995 Length=433444 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||| ||||| | || | |||||| || || || || ||||| ||||| || |||| Sbjct 321916 CTTCGTCTCTGCAAATAAGTTCATTGCTGAACGTCAAACCAGGCATCAAACCCCTCTTTT 321857 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | |||||| || | ||||| ||||| || |||||||| ||||| || |||||||||| Sbjct 321856 TCAACCAAAAAATGCCGGCAAATGATCCCGAGAAGAAAATTCCTTCGACCGCTGCAAATG 321797 Query 37318 CTAC 37321 | || Sbjct 321796 CGAC 321793 >seq13338 Length=646138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 226/342 (66%), Gaps = 2/342 (1%) Strand=Plus/Plus Query 37188 CAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAA 37247 |||| ||| | || ||||| || || ||||| ||| || || ||||| ||||| | | Sbjct 454011 CAATTAAAAACCTCGTCTCTGCTGATTAATTCGTTACTGAACGTCAATCCGGGCATCAGA 454070 Query 37248 CCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACT 37307 || | ||| || | ||||||||||| || || || || |||||||| || ||||| || Sbjct 454071 CCGCGTTTCTTTAGCCAAAATATTGACGCGAATGAACCGGAAAAGAAGATGCCTTCTACG 454130 Query 37308 GCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAttttttt 37367 || ||||| || | | || ||||| || | | | | ||||| | Sbjct 454131 GCCGCAAAAGCGATGATTCGCTCGCCGAACGTCGCCGTTTTGTTTCCGATCCAGTCAAGA 454190 Query 37368 GTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGttt 37427 | ||| ||||| |||||| || || || || || || || | | ||||| Sbjct 454191 GCCCACAACGCCTTCTTGCGCACACATGGCATCGTCTCGATCGCGTTGAACAAATAGTTT 454250 Query 37428 -ttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAAT 37486 ||||| || | ||| || ||||||| || | | || ||||| || || || || Sbjct 454251 CTTTTCATC-GTGTCTTGGATGTAAGTATTTATCAAAAGGCTGTACATCTCGGAATGGAT 454309 Query 37487 ATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528 ||| ||||| || || || || ||||||||| | | |||||| Sbjct 454310 ATTCTCAATCGCAATTTGGAATCCATAAAAAAAACGAGCTTC 454351 Score = 86.0 bits (94), Expect = 7e-12 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 36865 TACTATTCATAACTCC-CATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTC 36923 ||| ||||||||| || ||||| | ||||| |||||| | | ||||| ||||| ||| Sbjct 453558 TACGATTCATAACCCCGCATTTCGCG-TATTCGCCAACTTTTTTCTCGAAGAAATTCGTC 453616 Query 36924 TTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 || || || | |||||||| |||||||||||||||||||| Sbjct 453617 TTGCCCTCCAAAGATATATTCTCCATAAAATCAAATGGATT 453657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592207673033560