Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3343 120 4e-21
seq11814 114 2e-19
>seq3343
Length=1120
Score = 120 bits (132), Expect = 4e-21
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 1254345 CTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATC 1254404
||||| || || || | | ||| ||||| |||||||||||||| ||||| | | |||
Sbjct 42 CTGGCAAGCTCTCCAGGGAGGATGAGGCGGACGGCGGTCTGGATTTCGCGAGAGGAGATG 101
Query 1254405 GTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATG 1254464
|| |||||||| |||| || ||||| ||||| | |||| | |||| | |
Sbjct 102 GTCGATCGCTTGTTGTAGTGAGCGAGACGAGAAGCCTCACCGGCGATTCTCTCGAAGACG 161
Query 1254465 TCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGC 1254524
||||| || ||||||||||||| |||||| | |||| ||||| || ||| |||||
Sbjct 162 TCGTTCACGAACGAGTTCATGATCGACATAGCCTTGGAGGAGACTCCGGTGTCAGGGTGG 221
Query 1254525 ACCTGCTTGAGCACCTTGTAGATG 1254548
||||||||||| || |||||||
Sbjct 222 ACCTGCTTGAGGACACGGTAGATG 245
>seq11814
Length=1053
Score = 114 bits (126), Expect = 2e-19
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || || || | | ||| ||||| |||||||||||||| ||||| | | ||
Sbjct 855 GCTTGGCAAGCTCTCCAGGGAGGATGAGGCGGACGGCGGTCTGGATTTCGCGAGAGGAGA 914
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||||| |||| || ||||| ||||| | |||| | |||| |
Sbjct 915 TGGTCGATCGCTTGTTGTAGTGAGCGAGACGAGAAGCCTCACCGGCGATTCTCTCGAAGA 974
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||| || ||||||||||||| |||||| | |||| ||||| || ||| ||||
Sbjct 975 CGTCGTTCACGAACGAGTTCATGATCGACATAGCCTTGGAGGAGACTCCGGTGTCAGGGT 1034
Query 1254523 GCACCTGCTTGAGCAC 1254538
| ||||||||||| ||
Sbjct 1035 GGACCTGCTTGAGGAC 1050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105929648637263
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |