Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3343 120 4e-21 seq11814 114 2e-19 >seq3343 Length=1120 Score = 120 bits (132), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1254345 CTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATC 1254404 ||||| || || || | | ||| ||||| |||||||||||||| ||||| | | ||| Sbjct 42 CTGGCAAGCTCTCCAGGGAGGATGAGGCGGACGGCGGTCTGGATTTCGCGAGAGGAGATG 101 Query 1254405 GTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATG 1254464 || |||||||| |||| || ||||| ||||| | |||| | |||| | | Sbjct 102 GTCGATCGCTTGTTGTAGTGAGCGAGACGAGAAGCCTCACCGGCGATTCTCTCGAAGACG 161 Query 1254465 TCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGC 1254524 ||||| || ||||||||||||| |||||| | |||| ||||| || ||| ||||| Sbjct 162 TCGTTCACGAACGAGTTCATGATCGACATAGCCTTGGAGGAGACTCCGGTGTCAGGGTGG 221 Query 1254525 ACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||| || ||||||| Sbjct 222 ACCTGCTTGAGGACACGGTAGATG 245 >seq11814 Length=1053 Score = 114 bits (126), Expect = 2e-19 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||| ||||| |||||||||||||| ||||| | | || Sbjct 855 GCTTGGCAAGCTCTCCAGGGAGGATGAGGCGGACGGCGGTCTGGATTTCGCGAGAGGAGA 914 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| ||||| | |||| | |||| | Sbjct 915 TGGTCGATCGCTTGTTGTAGTGAGCGAGACGAGAAGCCTCACCGGCGATTCTCTCGAAGA 974 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||| || ||||||||||||| |||||| | |||| ||||| || ||| |||| Sbjct 975 CGTCGTTCACGAACGAGTTCATGATCGACATAGCCTTGGAGGAGACTCCGGTGTCAGGGT 1034 Query 1254523 GCACCTGCTTGAGCAC 1254538 | ||||||||||| || Sbjct 1035 GGACCTGCTTGAGGAC 1050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105929648637263