Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq9438 86.0 8e-12 >seq9438 Length=145779 Score = 86.0 bits (94), Expect = 8e-12 Identities = 202/294 (69%), Gaps = 17/294 (6%) Strand=Plus/Plus Query 192831 ATACCATTTTCCGAT-AGAACACAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAA 192889 || |||||| ||||| | ||| |||||| | ||||| || | | | | |||||| ||| Sbjct 51508 ATCCCATTTCCCGATCACAAC-CAATCTCCCAGAAACACTTATCAAAGTGCTATGGGTAA 51566 Query 192890 ACAAGCCATTGGATTTATTCCGTGTCAC-AACTTAAA------AACGGAAACAGTATCTC 192942 |||||| || || | || | |||| ||||| | || ||| || || ||| Sbjct 51567 ACAAGCTATGGGCAT-ATACA---TCACCAACTTTCATGTGCGAATGGACACGTTAGCTC 51622 Query 192943 ATACATTAAATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAA 193000 | ||| |||| |||||||||||| | | ||| || ||| | || | ||||| | Sbjct 51623 ACGTTTTATATTACCCACAAAAACCCTTGGCTACGACTCGATCTATGGAGTATTTACGAT 51682 Query 193001 ATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTA 193060 || | | || ||| ||||||||||||||||| || || || | || ||||| || Sbjct 51683 -TTCGTGAACTA-CCAGCAGGTATTAATGCTATTGTCGCAATTGCATCGTACACTGGATA 51740 Query 193061 TAATCAAGAAGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATT 193114 ||||||||||| |||||| |||| | | ||||||| |||||||| || Sbjct 51741 CAATCAAGAAGATTCAATTATTATAAACGCATCGGCTATTGACAGAGGATTTTT 51794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635060576466920