Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq13722 102 8e-17 seq7637 91.5 2e-13 >seq13722 Length=82832 Score = 102 bits (112), Expect = 8e-17 Identities = 165/232 (71%), Gaps = 9/232 (4%) Strand=Plus/Plus Query 106866 AAATGGCGCTTCCACCTTGTCATTGTCTTGTC-CAATTCTATGTGCGCAACAATACCCAT 106924 ||||||| || || |||||||| || ||| | ||||| || || | | || | | Sbjct 63886 AAATGGCTCTCCCTCCTTGTCAC-GTATTGGCTCAATTTTACGT---CTCCGATGGCGAA 63941 Query 106925 CTAGATTGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACATC 106984 || |||||| ||||||| |||| || ||||| || |||||||| || ||||||||| Sbjct 63942 TTATCGTGCCAGCTGTACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATC 64001 Query 106985 GCCAGCTACTCATTTCTAA--TGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGAC 107042 || |||||||| | || | |||| | |||| | ||| ||| ||| || ||| Sbjct 64002 GCTAGCTACTCCCTCCTCACCTGTA--TCCTGGCTCACGTGACTAATTTGAAGCCTGGAG 64059 Query 107043 GTTTTATCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGC 107094 ||||| || || || || |||| |||||| |||| || ||||||||| || Sbjct 64060 ACTTTATTCACACTTTAGGCGACGCGCATGTTTACTTGAATCATGTTGATGC 64111 >seq7637 Length=48035 Score = 91.5 bits (100), Expect = 2e-13 Identities = 121/166 (73%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 106931 TGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACATCGCCAGC 106990 |||||| ||||||| |||| || ||||| || |||||||| || ||||||||||| ||| Sbjct 7509 TGCCAGCTGTACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATCGCTAGC 7450 Query 106991 TACTCATTTCTAA--TGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGACGTTTTA 107048 ||||| | || | |||| | |||| | ||| ||| ||| || ||| |||| Sbjct 7449 TACTCCCTCCTCACTTGTA--TCCTGGCTCACGTGACTAATTTGAAGCCTGGAGACTTTA 7392 Query 107049 TCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGC 107094 | || | || || |||| ||||| |||| || ||||||||| || Sbjct 7391 TTCACAGTTTAGGCGACGCACATGTTTACTTGAATCATGTTGATGC 7346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521449511742520