Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq13722 102 8e-17
seq7637 91.5 2e-13
>seq13722
Length=82832
Score = 102 bits (112), Expect = 8e-17
Identities = 165/232 (71%), Gaps = 9/232 (4%)
Strand=Plus/Plus
Query 106866 AAATGGCGCTTCCACCTTGTCATTGTCTTGTC-CAATTCTATGTGCGCAACAATACCCAT 106924
||||||| || || |||||||| || ||| | ||||| || || | | || | |
Sbjct 63886 AAATGGCTCTCCCTCCTTGTCAC-GTATTGGCTCAATTTTACGT---CTCCGATGGCGAA 63941
Query 106925 CTAGATTGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACATC 106984
|| |||||| ||||||| |||| || ||||| || |||||||| || |||||||||
Sbjct 63942 TTATCGTGCCAGCTGTACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATC 64001
Query 106985 GCCAGCTACTCATTTCTAA--TGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGAC 107042
|| |||||||| | || | |||| | |||| | ||| ||| ||| || |||
Sbjct 64002 GCTAGCTACTCCCTCCTCACCTGTA--TCCTGGCTCACGTGACTAATTTGAAGCCTGGAG 64059
Query 107043 GTTTTATCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGC 107094
||||| || || || || |||| |||||| |||| || ||||||||| ||
Sbjct 64060 ACTTTATTCACACTTTAGGCGACGCGCATGTTTACTTGAATCATGTTGATGC 64111
>seq7637
Length=48035
Score = 91.5 bits (100), Expect = 2e-13
Identities = 121/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Minus
Query 106931 TGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACATCGCCAGC 106990
|||||| ||||||| |||| || ||||| || |||||||| || ||||||||||| |||
Sbjct 7509 TGCCAGCTGTACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATCGCTAGC 7450
Query 106991 TACTCATTTCTAA--TGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGACGTTTTA 107048
||||| | || | |||| | |||| | ||| ||| ||| || ||| ||||
Sbjct 7449 TACTCCCTCCTCACTTGTA--TCCTGGCTCACGTGACTAATTTGAAGCCTGGAGACTTTA 7392
Query 107049 TCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGC 107094
| || | || || |||| ||||| |||| || ||||||||| ||
Sbjct 7391 TTCACAGTTTAGGCGACGCACATGTTTACTTGAATCATGTTGATGC 7346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521449511742520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |