Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq13338 163 5e-35 >seq13338 Length=646138 Score = 163 bits (180), Expect = 5e-35 Identities = 239/338 (71%), Gaps = 0/338 (0%) Strand=Plus/Plus Query 142968 GATAAAGATGAGTGGACTACTTGGaaaaaaaTACCCGATCCCGTCTTGCATATAGAACTT 143027 || |||||||| ||| || ||||||| || || || || | ||||| ||||| Sbjct 624890 GACAAAGATGAATGGGACACCTGGAAAACTATGAAAGACCCAGTGCTACATATTGAACTA 624949 Query 143028 AGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATA 143087 | |||||||| ||| | ||| |||| || || ||| || ||||||||||| ||||| Sbjct 624950 CGTAGATGGGCTGATTTATTTGTTATTGCTCCGTTAGATGCTAATACGTTAGCCAAAATG 625009 Query 143088 GCCAACGGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAA 143147 || || || || || ||||||||| | || | | ||| |||||| ||||| || ||| Sbjct 625010 GCTAATGGAATGTGTGATAATTTAATTACTTGTGTAGCAAGAGCTTGGGACCCTAAAAAA 625069 Query 143148 CCTCTTATTTTTTGTCCCGCTATGAATAGCCTTATGTGGGAACATCCTATTACAGAAAAA 143207 |||||| |||| || || || ||||||| |||||||||||||||| | |||| | Sbjct 625070 CCTCTTCTTTTCTGCCCTGCCATGAATACATTTATGTGGGAACATCCATTAACAGCAGTT 625129 Query 143208 CATATAGATGCTTTAAAACATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTA 143267 ||||| || | | ||| | | |||| |||| ||| | | |||||| |||| Sbjct 625130 CATATTGACAATATGAAAAAATTAGGTTATGTAGAGATACCAGTTGTTAAAAAAACACTA 625189 Query 143268 GCCTGCGGAGACATAGGAAATGGTGCTATGGCAGAAGT 143305 || || || || | ||| ||||||| ||||| || || Sbjct 625190 GCATGTGGTGATACAGGTTATGGTGCAATGGCTGAGGT 625227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903244757779040