Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq11814 141 1e-27 seq3343 141 1e-27 >seq11814 Length=1053 Score = 141 bits (156), Expect = 1e-27 Identities = 167/223 (75%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 724920 GTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATC 724979 || ||||||||||| ||||| |||| | | | |||||||| | | ||||||||| Sbjct 1050 GTCCTCAAGCAGGTCCACCCTGACACCG--GAGTC-TCCTCCAA---GGCTATGTCGATC 997 Query 724980 ATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCG 725039 ||||||||||| || |||||| | |||| | |||| | ||||| ||| || || Sbjct 996 ATGAACTCGTTCGTGAACGACGTCTTCGAGAGAATCGCCGGTGAGGCTTCTCGTCTCGCT 937 Query 725040 CGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATC 725099 | || ||||||||| || ||| | | ||||| |||||||||||||| ||||| ||| Sbjct 936 CACTACAACAAGCGATCGACCATCTCCTCTCGCGAAATCCAGACCGCCGTCCGCCTCATC 877 Query 725100 ATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | || || || |||| ||||||||||||||||||||||| Sbjct 876 CTCCCTGGAGAGCTTGCCAAGCACGCCGTCTCCGAGGGCACCA 834 >seq3343 Length=1120 Score = 141 bits (156), Expect = 1e-27 Identities = 173/232 (75%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || ||||||||||| ||||| |||| | | | |||||||| | | Sbjct 244 ATCTACCGTGTCCTCAAGCAGGTCCACCCTGACACCG--GAGTC-TCCTCCAA---GGCT 191 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 |||||||||||||||||||| || |||||| | |||| | |||| | ||||| | Sbjct 190 ATGTCGATCATGAACTCGTTCGTGAACGACGTCTTCGAGAGAATCGCCGGTGAGGCTTCT 131 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || || | || ||||||||| || ||| | | ||||| |||||||||||||| Sbjct 130 CGTCTCGCTCACTACAACAAGCGATCGACCATCTCCTCTCGCGAAATCCAGACCGCCGTC 71 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| ||| | | || || || |||| ||||||||||||||||||||||| Sbjct 70 CGCCTCATCCTCCCTGGAGAGCTTGCCA-GCACGCCGTCTCCGAGGGCACCA 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176389596359718