Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq13894 147 2e-30
seq12471 136 4e-27
>seq13894
Length=1211295
Score = 147 bits (162), Expect = 2e-30
Identities = 173/230 (75%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTT-TGAATGTTGTAGTC-GC 134544
|| ||||| | |||| ||| || || || || ||||||||| || |||||||| || |
Sbjct 231718 CCGCCTCTCAAACGCAGCACAAGATGAAGGGTCGATTCCTTTCTGGATGTTGTAATCTGA 231777
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
||| | | | | || || || ||||| || ||||| ||||||||||||||||| || |
Sbjct 231778 CAAGGTTCGGCCA-TCTTCCAGTTGTTTACCGGCAAAGATCAAACGCTGCTGATCCGGAG 231836
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| ||||||||||| ||||| ||||| || || || | ||| ||||| | ||| |
Sbjct 231837 GAATGCCTTCTTTGTCTTGGATTTTCGCCTTCACGTTTTCGATTGTATCGGAAGGTTCGA 231896
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
| || || || ||||| || || ||||||||||| |||||||| ||||||
Sbjct 231897 CTTCAAGCGTGATGGTCTTCCCAGTTAAAGTTTTCACGAAAATCTGCATT 231946
Score = 143 bits (158), Expect = 3e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| ||||| | |||||| || | || || || |||||||| || |||||||| |||
Sbjct 231488 TTCCACCTCTCAATCGCAAAACCAAATGCAGAGTCGATTCCTTCTGGATGTTGTAATCGG 231547
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| ||| | || || | || || || |||||||| ||||| || || ||||| |
Sbjct 231548 ACAAGGTTCGGCCATCTTCCAATTGCTTTCCCGCAAAAATTAAACGTTGTTGGTCGGGTG 231607
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| ||||||||||| || || ||||| ||||| || | ||||| || | ||| |
Sbjct 231608 GGATGCCTTCTTTGTCCTGGATTTTCGCCTTGACATTCTCAATGGTGTCCGATGGTTCGA 231667
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| |||||||| || |||||||||||||| |||||||| |||||
Sbjct 231668 CTTCGAGGGTAATGGTCTTTCCGGTTAAAGTTTTCACGAAAATCTGCAT 231716
Score = 140 bits (154), Expect = 3e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | ||||| || || || || || |||||||| || ||||||||||||
Sbjct 232175 CCGCCTCTTAAACGCAATACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAT 232234
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || | || ||||| |||||||| || || |||||||| || ||
Sbjct 232235 AAGGTTCGGCCATCTTCCAATTGCTTGCCCGCAAAAATTAATCGTTGCTGATCCGGTGGG 232294
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665
|| |||||||| || || ||||| || | || | |||| || ||||| | || ||
Sbjct 232295 ATACCTTCTTTATCCTGGATTTTCGCCTTCA-CGTTTTCAATCGTATCGGAAGGCTCGAC 232353
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|||||||| ||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct 232354 TTCGAGAGTTATGGTCTTACCGGTTAAGGTTTTCACAAAAATCTGCATTTT 232404
>seq12471
Length=105862
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| || |||||||| || |||||||||||||||| | ||| | || ||
Sbjct 72386 CACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCGCTTAAAGTGCGGCCATCCTC 72445
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| |||||| || |||||||||| |||||| |||||||| || || ||||| || |||||
Sbjct 72446 CAACTGTTTACCGGCAAAAATCAGACGCTGTTGATCGGGTGGGATTCCTTCCTTATCTTG 72505
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|||||| ||| || || | |||||| | || || |||||||||||||| ||
Sbjct 72506 AATTTTAGCTTTTACATTCTCGATCGTGTCGCTTGGCTCAACTTCGAGAGTAATGGTCTT 72565
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | |||||| || || || |||||
Sbjct 72566 TCCAGTAAGAGTTTTGACAAAGATCTGCAT 72595
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
||||||||| | | ||| || | || | || ||||| || || |||||||||||||
Sbjct 73630 TTCCTCCTCGCAACCTCAATACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGC 73689
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| ||| | ||| |||||||| || || || |||||||| ||||| |||||||| |
Sbjct 73690 TAAGTGTGCGGCCGTCTTCGAGCTGCTTTCCAGCGAAAATCAATCGCTGTTGATCGGGAG 73749
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || ||||| || || ||||| || || || || | |||||| | ||||
Sbjct 73750 GAATTCCTTCCTTATCCTGAATCTTGGCCTTCACGTTCTCGATCGTGTCGCTTGGCTCCA 73809
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || | |||||| ||||| || || | |||||||| ||||| |||||
Sbjct 73810 CCTCCAAAGTAATAGTTTTTCCAGTGAGGGTTTTAACAAAAATCTGCAT 73858
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| || |||||||||||||| |||||||| |||| | || || || || | |||
Sbjct 72621 TGCAGAGTGGATTCCTTTTGGATGTTGTAATCGCTCAATGTACGACCATCTTCCAATTGT 72680
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || || |||||||||||||| ||||| || || || || ||||| ||||| || ||
Sbjct 72681 TTTCCAGCGAAAATCAAACGCTGTTGATCCGGAGGGATCCCCTCTTTATCTTGGATCTTG 72740
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| | ||| || || | ||| ||||| || || ||
Sbjct 72741 GCTTTGACATTTTCGATCGTGTCACTAGGTTCAACCTCTAAAGTGATGGTCTTGCCAGTC 72800
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| ||||||||
Sbjct 72801 AAGGTCTTAACGAAGATTTGCAT 72823
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| ||||| ||||| || || |||||||| |||| | ||| | || ||
Sbjct 73131 CACCAAGTGAAGCGTCGATTCTTTCTGGATGTTGTAATCGCTGAGTGTGCGTCCATCTTC 73190
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| ||||| || || |||||||||||||| ||||| || || || |||||||| |||||
Sbjct 73191 CAATTGTTTTCCAGCGAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTGTCTTG 73250
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
||| || ||| || || | |||||| | || || ||||| ||||| |||||
Sbjct 73251 AATCTTGGCTTTTACATTCTCGATAGTGTCGCTTGGCTCAACTTCGAGCGTAATAGTTTT 73310
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | ||||| || ||||| |||||
Sbjct 73311 TCCAGTGAGGGTTTTGACAAAAATCTGCAT 73340
Score = 109 bits (120), Expect = 6e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|| ||||| ||||| || ||||||||||| |||| || ||| || || ||||| |||
Sbjct 72910 TGAAGCGTTGATTCTTTCTGAATGTTGTAATCGCTAAGTGTGCGACCATCTTCGAGTTGT 72969
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| || | |||||| ||||| || || || |||||||| ||||| || ||
Sbjct 72970 TTCCCAGCAAAGATTAGACGCTGTTGATCTGGTGGGATCCCTTCTTTGTCTTGGATCTTG 73029
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|||||| || | ||||| | || || || | || ||||| || || ||
Sbjct 73030 GCTTTGACATTTTCGATAGTGTCACTAGGCTCGACTTCCAACGTGATGGTCTTGCCAGTC 73089
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| ||||| ||||| ||||||||
Sbjct 73090 AGGGTTTTGACGAAGATTTGCAT 73112
Score = 102 bits (112), Expect = 8e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| || || ||||| || |||||||||||||||| | ||| || || ||
Sbjct 73421 CACCAAGTGAAGAGTTGATTCTTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCTTC 73480
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
| ||||| || || || ||||||||||| ||||| || || || |||||||| |||||
Sbjct 73481 CAATTGTTTACCGGCGAAGATCAAACGCTGTTGATCTGGAGGAATCCCTTCTTTGTCTTG 73540
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || ||| || || | || || | || || || | |||||||||||
Sbjct 73541 GATCTTGGCTTTCACATTCTCAATGGTATCACTTGGCTCGACTTCCAAGGTAATGGTTTT 73600
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
|| || | ||||| ||||| || ||||||
Sbjct 73601 TCCAGTGAGTGTTTTGACGAAGATCTGCATT 73631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505305286662280
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