Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq13722 104 2e-17 >seq13722 Length=82832 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 111721 TGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCA 111780 ||||| || ||||||||||| || |||| | || || || || | ||||| |||| | Sbjct 64102 TGATTCAAGTAAACATGCGCGTCGCCTAAAGTGTGAATAAAGTCTCCAGGCTTCAAATTA 64043 Query 111781 GTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCT 111840 || | ||| || | || | ||||| || ||| ||||| ||||| || ||||| || Sbjct 64042 GTCACGTGAGCCAGGATACAGGTGAGGAGGGAGTAGCTAGCGATGTTGAAAGGCACTCCG 63983 Query 111841 AGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATAA 111900 || |||||||| | |||| || || ||||| || |||| || | || || ||| Sbjct 63982 AGTCCCATATCAGCTGATCGCTGGTACAGCTGGCACGATAATTCGCCATCGGAGACGTAA 63923 Query 111901 AATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 |||||| | ||| ||||||||||| | ||||| Sbjct 63922 AATTGAGCCAATACGTGACAAGGAGGGAGAGCCAT 63888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391875194199457