Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq14281 95.1 1e-14
seq12159 89.7 6e-13
>seq14281
Length=634769
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||||||||| |||| ||||||||||| |||||||| |||||| ||||| |||||
Sbjct 479405 GTGAAAATGTATCGAGGACTTGCAGCATCTTTGCCACCTTGAAGACGTGTACCAAATTGA 479346
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | |||| ||| | || | || ||| || |||||||| || |||||||| | |
Sbjct 479345 CCAATTGGCTGCAAAATATTAATATTATTGCTTCCTACAAAGTTCTGCGCCAAGTTTATA 479286
Query 117425 ATCGT 117429
|| ||
Sbjct 479285 ATGGT 479281
>seq12159
Length=131859
Score = 89.7 bits (98), Expect = 6e-13
Identities = 187/275 (68%), Gaps = 3/275 (1%)
Strand=Plus/Plus
Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208
||||| |||||||| || || ||||| | | |||||| || | | |||||||||
Sbjct 67453 AACCC-GTTCCGATTCCATCGCTGCCATTGACTAAAATCATGGGTATAATGGGAACGTAG 67511
Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268
|||| || || | | |||| ||||| | | | ||||||| | | || |
Sbjct 67512 TACTCCGGTTCGATTTTCAGATTATCGTCGTTCAGATGATTGAGCAATGGCTGATCTTTA 67571
Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGA-GTGAAAATGTAACGAGAGCTTGC 117327
|| ||| |||| || | |||||| || | ||| |||||| |||| || ||
Sbjct 67572 ACATTGAAAATGTGTTTTG-CCACGGGACTTAACATCGTGTGAATGTATCGAGGACTCGC 67630
Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387
||| || ||||| || ||| || ||||||||||| ||| | || | | ||| || |
Sbjct 67631 AGCGTCTTTGCCGCCTTGAAGTCGAGTACCGAATTGGCCAATGGGTTGAAGGAGATTGAT 67690
Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422
||||||| ||||||||||||||| || || ||||
Sbjct 67691 GTTGTTGCTGCCCACAAAGTTTTGTGCTAAATTGA 67725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547115182292200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |