Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq13338 116 4e-21
seq6342 84.2 3e-11
>seq13338
Length=646138
Score = 116 bits (128), Expect = 4e-21
Identities = 137/184 (74%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 89211 CATATAGAACTTAGGAGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACT 89270
||||| ||||| | || ||||||||| ||||| |||| || || || ||||||||
Sbjct 624938 CATATTGAACTACGTAGATGGGCTGATTTATTTGTTATTGCTCCGTTAGATGCTAATACG 624997
Query 89271 CTAGCGAAGATAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGG 89330
|||| || || |||||||| || || || || ||| | |||| | ||| || || |||
Sbjct 624998 TTAGCCAAAATGGCTAATGGAATGTGTGATAATTTAATTACTTGTGTAGCAAGAGCTTGG 625057
Query 89331 GATATATCAAAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAATGTGGGAACATCCT 89390
|| ||| || ||| |||| || |||||||||||||| | ||||||||||||||
Sbjct 625058 GACCCTAAAAAACCTCTTCTTTTCTGCCCTGCCATGAATACATTTATGTGGGAACATCC- 625116
Query 89391 ATTA 89394
||||
Sbjct 625117 ATTA 625120
>seq6342
Length=239981
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 32850 ATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGATTAACAGCAATAGGTCCT 32909
||||| |||||||| || ||||||||||||| ||| ||||| | || || |||| ||
Sbjct 168596 ATAAACTCTTTTATCCACGTTATAATGTATACTTACTACGGCATTGCATCATTAGGGCCC 168537
Query 32910 TCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATCATACAATTG 32960
| || ||||||| | ||||||||||||||||| || | || ||| ||
Sbjct 168536 AAATGGCAAAAATATTTGTGGTGGAAAAAATATTTCACAACAATGCAAATG 168486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603069671477360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |