Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_028749.1
Length=134270
Score E
Sequences producing significant alignments: (Bits) Value
seq3891 84.2 2e-11
>seq3891
Length=1033
Score = 84.2 bits (92), Expect = 2e-11
Identities = 228/342 (67%), Gaps = 14/342 (4%)
Strand=Plus/Minus
Query 97408 TTTTGTTCTTGTATAATACAGCCCTTTCAAGCCTTTCTTCTGTGCGTAGATATA-ATACT 97466
||| ||||| |||||||| | |||| |||||||| | || || || | ||| | ||
Sbjct 583 TTTAGTTCTAGTATAATATAATGCTTTTAAGCCTTTATGATGAGCATAAAGATACAGACG 524
Query 97467 TAACAAGGTCTTC---TGTAGTTTGATTGCTATCTACGAATAGAGTTGTTGAAATTCCTT 97523
||| | |||| ||| ||||| || || || ||| | | || ||| ||||
Sbjct 523 -AACTAACTCTTTGGTTGTGGTTTGGTTAGTA---ACATATAAAATAGTACTAATCCCTT 468
Query 97524 GGTCAACATGTTTTTGAATTGTAGCAACCAAGTCAATGTATTTGAACATATTCACTTCAT 97583
|||| ||||| ||||||| | || || || || || ||| ||||| || | ||
Sbjct 467 GGTCTACATGCCTTTGAATATTTGCCACTAAATCTATTAGTTTAGTCATATCCATATTAT 408
Query 97584 AAGCAGGTGTATaaaaaaaCATATTTTCATTTGTCATGTAAGGCATTGGATAATGGGTCA 97643
| |||| | |||| ||||| ||||| || | | | |||||||||||||||| |
Sbjct 407 ATGCAGATTTATATAAAAAGATATTATCTTGACTTAAATAAGGCATTGGATAATATGAAG 348
Query 97644 CACTATCACCATAAGTTCTTGTTTCAATCTGTTCTGTAATAGGTGTAATTGAAGCTGTAG 97703
| | || |||||||| ||||| | | ||| || || ||||||||| ||||
Sbjct 347 TAGAGTTTCCGTAAGTTCTAGTTTCTACCACATCTACAACCGGCATAATTGAAGAAGTAG 288
Query 97704 CTGATTGAACATAAGAGATTGAGC-CT--GTAGGAGCAATAG 97742
||| | |||||| || || || || ||||||||||
Sbjct 287 AATTTTGTATATAAGAAAT---GCTCTGAGTTGGAGCAATAG 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429462041202349
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |