Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_028749.1 Length=134270 Score E Sequences producing significant alignments: (Bits) Value seq3891 84.2 2e-11 >seq3891 Length=1033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 228/342 (67%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 97408 TTTTGTTCTTGTATAATACAGCCCTTTCAAGCCTTTCTTCTGTGCGTAGATATA-ATACT 97466 ||| ||||| |||||||| | |||| |||||||| | || || || | ||| | || Sbjct 583 TTTAGTTCTAGTATAATATAATGCTTTTAAGCCTTTATGATGAGCATAAAGATACAGACG 524 Query 97467 TAACAAGGTCTTC---TGTAGTTTGATTGCTATCTACGAATAGAGTTGTTGAAATTCCTT 97523 ||| | |||| ||| ||||| || || || ||| | | || ||| |||| Sbjct 523 -AACTAACTCTTTGGTTGTGGTTTGGTTAGTA---ACATATAAAATAGTACTAATCCCTT 468 Query 97524 GGTCAACATGTTTTTGAATTGTAGCAACCAAGTCAATGTATTTGAACATATTCACTTCAT 97583 |||| ||||| ||||||| | || || || || || ||| ||||| || | || Sbjct 467 GGTCTACATGCCTTTGAATATTTGCCACTAAATCTATTAGTTTAGTCATATCCATATTAT 408 Query 97584 AAGCAGGTGTATaaaaaaaCATATTTTCATTTGTCATGTAAGGCATTGGATAATGGGTCA 97643 | |||| | |||| ||||| ||||| || | | | |||||||||||||||| | Sbjct 407 ATGCAGATTTATATAAAAAGATATTATCTTGACTTAAATAAGGCATTGGATAATATGAAG 348 Query 97644 CACTATCACCATAAGTTCTTGTTTCAATCTGTTCTGTAATAGGTGTAATTGAAGCTGTAG 97703 | | || |||||||| ||||| | | ||| || || ||||||||| |||| Sbjct 347 TAGAGTTTCCGTAAGTTCTAGTTTCTACCACATCTACAACCGGCATAATTGAAGAAGTAG 288 Query 97704 CTGATTGAACATAAGAGATTGAGC-CT--GTAGGAGCAATAG 97742 ||| | |||||| || || || || |||||||||| Sbjct 287 AATTTTGTATATAAGAAAT---GCTCTGAGTTGGAGCAATAG 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429462041202349