Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq13894 95.1 1e-14
>seq13894
Length=1211295
Score = 95.1 bits (104), Expect = 1e-14
Identities = 168/239 (70%), Gaps = 6/239 (3%)
Strand=Plus/Plus
Query 101002 ATTACTATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATT 101061
||||| ||| || |||| ||||| || |||| |||| ||| ||||| || || || ||
Sbjct 231482 ATTAC-ATT-CCACCTCTCAATCGCAAAACCAAATGCAGAGTCGATTCCTTCTGGATGTT 231539
Query 101062 GTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTG 101121
|||||||| || ||| | |||||||||||| || |||||| | || | | ||||||
Sbjct 231540 GTAATCGGACAAGGTTCGGCCATCTTCCAATTGCTTTCCCGCAAAAATTAAACGTTGTTG 231599
Query 101122 GTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTG- 101180
||| || | |||||||||||| ||||| || |||| | | || || |
Sbjct 231600 GTCGGGTGGGATGCCTTCTTTGTCCTGGATTTTCGCCTTGACATTCTCAATGGTGTCCGA 231659
Query 101181 TGG-ACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
||| || ||||| |||||| || || || || || ||||| | ||||| |||||
Sbjct 231660 TGGTTCG--ACTTCGAGGGTAATGGTCTTTCCGGTTAAAGTTTTCACGAAAATCTGCAT 231716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409587211990401
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |