Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7637 123 2e-23 seq13722 118 9e-22 >seq7637 Length=48035 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29720 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCG 29779 || |||||||||| || | |||||||| |||||||| |||||||| || ||||| ||| Sbjct 7415 GTCACGTGAGCCAGGATACAAGTGAGGAGGGAGTAGCTAGCGATGTTGAAAGGCACTCCG 7474 Query 29780 AGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAA 29839 || ||||| || |||| | |||||| ||||||||||| | || || ||| |||||| Sbjct 7475 AGTCCCATATCAGCTGATCGCTGGTACAGCTGGCACGATAATTCGCCTTCGGAGACGTAA 7534 Query 29840 AACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAG 29899 || ||| || | || || ||| | || ||||| |||||| |||||||| Sbjct 7535 AATTGAGCCAATACGTGACAAGGACGGAGAGCCATTTTCGATAAGTCTGATGGGTTCCAC 7594 Query 29900 GCACACACGATGATGCGCCTGTC 29922 | | ||| |||||||| ||||| Sbjct 7595 GAAGACATGATGATGCCTCTGTC 7617 >seq13722 Length=82832 Score = 118 bits (130), Expect = 9e-22 Identities = 154/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 29663 TCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTG 29722 ||||| || || || || || || | ||||| | ||| ||||| || | | || Sbjct 64098 TCAAG-TAAACATGCGCGTCGCCTAAAGTGTGAATAAAGTCTCCAGGCTTCAAATTAGTC 64040 Query 29723 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGC 29782 |||||||||| || | |||||||| |||||||| |||||||| || ||||| ||||| Sbjct 64039 ACGTGAGCCAGGATACAGGTGAGGAGGGAGTAGCTAGCGATGTTGAAAGGCACTCCGAGT 63980 Query 29783 CCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAAC 29842 ||||| || |||| | |||||| ||||||||||| | || || ||| |||||||| Sbjct 63979 CCCATATCAGCTGATCGCTGGTACAGCTGGCACGATAATTCGCCATCGGAGACGTAAAAT 63920 Query 29843 TGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 ||| || | || || ||||| || ||||| Sbjct 63919 TGAGCCAATACGTGACAAGGAGGGAGAGCCAT 63888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406090240269754