Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq7637 123 2e-23
seq13722 118 9e-22
>seq7637
Length=48035
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 29720 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCG 29779
|| |||||||||| || | |||||||| |||||||| |||||||| || ||||| |||
Sbjct 7415 GTCACGTGAGCCAGGATACAAGTGAGGAGGGAGTAGCTAGCGATGTTGAAAGGCACTCCG 7474
Query 29780 AGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAA 29839
|| ||||| || |||| | |||||| ||||||||||| | || || ||| ||||||
Sbjct 7475 AGTCCCATATCAGCTGATCGCTGGTACAGCTGGCACGATAATTCGCCTTCGGAGACGTAA 7534
Query 29840 AACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAG 29899
|| ||| || | || || ||| | || ||||| |||||| ||||||||
Sbjct 7535 AATTGAGCCAATACGTGACAAGGACGGAGAGCCATTTTCGATAAGTCTGATGGGTTCCAC 7594
Query 29900 GCACACACGATGATGCGCCTGTC 29922
| | ||| |||||||| |||||
Sbjct 7595 GAAGACATGATGATGCCTCTGTC 7617
>seq13722
Length=82832
Score = 118 bits (130), Expect = 9e-22
Identities = 154/212 (73%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 29663 TCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTG 29722
||||| || || || || || || | ||||| | ||| ||||| || | | ||
Sbjct 64098 TCAAG-TAAACATGCGCGTCGCCTAAAGTGTGAATAAAGTCTCCAGGCTTCAAATTAGTC 64040
Query 29723 ACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGC 29782
|||||||||| || | |||||||| |||||||| |||||||| || ||||| |||||
Sbjct 64039 ACGTGAGCCAGGATACAGGTGAGGAGGGAGTAGCTAGCGATGTTGAAAGGCACTCCGAGT 63980
Query 29783 CCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAAC 29842
||||| || |||| | |||||| ||||||||||| | || || ||| ||||||||
Sbjct 63979 CCCATATCAGCTGATCGCTGGTACAGCTGGCACGATAATTCGCCATCGGAGACGTAAAAT 63920
Query 29843 TGACACATGGCATGGCACGGAGGAAGGGCCAT 29874
||| || | || || ||||| || |||||
Sbjct 63919 TGAGCCAATACGTGACAAGGAGGGAGAGCCAT 63888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406090240269754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |