Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_031039.1 Length=251042 Score E Sequences producing significant alignments: (Bits) Value seq3891 138 2e-27 >seq3891 Length=1033 Score = 138 bits (152), Expect = 2e-27 Identities = 320/476 (67%), Gaps = 10/476 (2%) Strand=Plus/Minus Query 190904 ACAAATAAAGTAGTAGAAATACCCTGATCAATATGTTGTTGGATTACTGCAACCATGTCA 190963 ||| ||||| ||||| ||| || || || | ||| ||| || ||| || | || Sbjct 492 ACATATAAAATAGTACTAATCCCTTGGTCTACATGCCTTTGAATATTTGCCACTAAATCT 433 Query 190964 ATAATTTTATTTTGATCCATATCATATGCTGATTTGTAAGACCATTGAGT-TCTACCGTC 191022 || | |||| | |||||||| |||||| ||||| || | | | | ||| | Sbjct 432 ATTAGTTTAGTCATATCCATATTATATGCAGATTTATATAAAAAGATATTATCTTGACT- 374 Query 191023 TAGATATGGCATTGGATAGTATGTTGTAGAGTCATGATATGTTCTGTTTTCAATTCGACT 191082 || ||| ||||||||||| |||| ||||||| || ||||| |||| | | Sbjct 373 TAAATAAGGCATTGGATAATATGAAGTAGAGTTTCCGTAAGTTCTAGTTTCTACCACATC 314 Query 191083 TACAACTGGCATAATAGATTGAGTTGAATTCTGTACATAACTAATTGACTGTGTAGGTGC 191142 |||||| |||||||| || ||| ||||| |||| |||| ||| ||| || || || Sbjct 313 TACAACCGGCATAATTGAAGAAGTAGAATTTTGTATATAAGAAATGCTCTGAGTTGGAGC 254 Query 191143 AATAGCAAGTCTATAAGCATGGTATAAACCATTTTCTTTTACTTGT-TCTGCTAATTCAG 191201 ||||| || ||||||||||| || | |||| ||||| ||| | ||| || || Sbjct 253 AATAGAGAGCCTATAAGCATGATAAAGCCCATGTTCTTGCACTGCTGTCT-TTAGCTCGT 195 Query 191202 CCCAATCTTCTTTTGTTGGAACAAAGATTCCCTCAAATAATTCTTTTACTTTTTGACTTC 191261 |||||| || | |||| ||| || || |||| | |||| | || |||| || Sbjct 194 TCCAATCATCCAAGCTAGGAATAAACATACCGGCAAAAATCTCTTGAATTTCTTGAGTTT 135 Query 191262 TAGGTGTATAATCATTTTCGATATAACGTTTAAAATAATTACCATTAGCATATTCAGAAT 191321 |||| | | |||| | ||| | ||| |||||||||||||| || ||| ||||| | Sbjct 134 TAGGAGAAAAATCTTCTTCTAAATATATCTTAAAATAATTACCGTTTTTATACTCAGATT 75 Query 191322 CTTCAAAA---CGATGGAAttttttatttttCTCAATAGCAATTTCCATACTTCGT 191374 |||||| | | || ||||| || || |||||||||||||||| ||| Sbjct 74 TCTCAAAACCTCTAAAGATACTTTTAGTT---TCTTTAGCAATTTCCATACTCCGT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 803058419260880