Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq12471 118 2e-21
seq13894 113 1e-19
>seq12471
Length=105862
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949
||||| || | ||||| || || ||||| || |||||||| ||| |||||| | |||
Sbjct 72381 CTGAGCACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCGCTTAAAGTGCGGCCA 72440
Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || | ||| ||||| || || || | ||| || || | | ||||||||||||
Sbjct 72441 TCCTCCAACTGTTTACCGGCAAAAATCAGACGCTGTTGATCGGGTGGGATTCCTTCCTTA 72500
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
||||||||||| ||| ||| |||| | |||| ||| ||||| ||||||||
Sbjct 72501 TCTTGAATTTTAGCTTTTACATTCTCGATCGTGTCGCTTGGCTCAACTTCGAGAGTAATG 72560
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || |||| ||||||
Sbjct 72561 GTCTTTCCAGTAAGAGTTTTGACAAAGATCTGCAT 72595
Score = 105 bits (116), Expect = 2e-17
Identities = 152/212 (72%), Gaps = 7/212 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| || ||||| || |||||||| ||| ||||| | |||||||| |
Sbjct 73424 CAAG-TGAAGAGTTGATTCTTTCTGAATGTTGTAGTCGCTCAAAGTGCGACCATCTTCCA 73482
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| ||||||||||| | | ||| || || | | || ||||| || ||||| |
Sbjct 73483 ATTGTTTACCGGCGAAGATCAAACGCTGTTGATCTGGAGGAATCCCTTCTTTGTCTTGGA 73542
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073
| || ||| ||| |||| | | | || ||| ||| ||||| | ||||| ||||
Sbjct 73543 TCTTGGCTTTCACATTCTCAATGGTATC---ACTTGGCTCGACTTCCAAGGTAATGGTTT 73599
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || ||||| || || ||||||| |||||||
Sbjct 73600 TTCCAGTGAGTGTTTTGACGAAGATCTGCATT 73631
Score = 100 bits (110), Expect = 7e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151890 CTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCA 151949
||||| || | ||||| || || ||||| ||||||||||||||| | || | |||
Sbjct 73126 CTGAGCACCAAGTGAAGCGTCGATTCTTTCTGGATGTTGTAATCGCTGAGTGTGCGTCCA 73185
Query 151950 TCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
||||| | ||| || ||||| || | | ||| || |||| | || ||||| ||
Sbjct 73186 TCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGTTGATCCGGAGGAATCCCTTCTTTG 73245
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|||||||| || ||| ||| |||| | |||| ||| ||||| || ||||||
Sbjct 73246 TCTTGAATCTTGGCTTTTACATTCTCGATAGTGTCGCTTGGCTCAACTTCGAGCGTAATA 73305
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || ||||| || || || || | ||||||
Sbjct 73306 GTTTTTCCAGTGAGGGTTTTGACAAAAATCTGCAT 73340
Score = 96.9 bits (106), Expect = 8e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCATCTTCTAGGC 151959
|||||| || || ||||| || ||||||||||| ||||| || | |||||||| ||
Sbjct 72909 ATGAAGCGTTGATTCTTTCTGAATGTTGTAATC-GCTAAGTGTGCGACCATCTTCGAGTT 72967
Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019
|||||| || ||||| || | ||| || || | | ||| ||||| || ||||| || |
Sbjct 72968 GTTTCCCAGCAAAGATTAGACGCTGTTGATCTGGTGGGATCCCTTCTTTGTCTTGGATCT 73027
Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079
| ||||||| | || | |||| | ||| ||||| | || || || ||||| |
Sbjct 73028 TGGCTTTGACATTTTCGATAGTGTCACTAGGCTCGACTTCCAACGTGATGGTCTTGCCAG 73087
Query 152080 TGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || ||||||| |||||
Sbjct 73088 TCAGGGTTTTGACGAAGATTTGCAT 73112
Score = 89.7 bits (98), Expect = 1e-12
Identities = 148/211 (70%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| |||||||||||||||||| || || | ||||| || |
Sbjct 72161 CAAG-TGGAGCGTGGACTCCTTTTGGATGTTGTAATCGCTCAATGTGCGACCATCCTCGA 72219
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| ||| || || ||||| | | ||| ||||| | || ||||| || || ||||| |
Sbjct 72220 GTTGTTTACCAGCAAAGATCAATCGCTGTTGGTCGGGCGGAATTCCCTCTTTGTCTTGGA 72279
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073
| || |||||| | || | | |||| ||| ||| ||||| | || || || |
Sbjct 72280 TCTTAGCCTTGACATTTTCAATGGTGTC---ACTTGGCTCGACTTCCAATGTGATGGTCT 72336
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || || || || || |||| ||||||
Sbjct 72337 TGCCAGTCAGGGTTTTGACAAAGATCTGCAT 72367
Score = 87.8 bits (96), Expect = 4e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| ||||| || || |||||||||||||||||| || || | |||||
Sbjct 72611 GAGAACCAAATGCAGAGTGGATTCCTTTTGGATGTTGTAATCGCTCAATGTACGACCATC 72670
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| | ||| || ||||| || | | ||| || |||| | ||| || || || ||
Sbjct 72671 TTCCAATTGTTTTCCAGCGAAAATCAAACGCTGTTGATCCGGAGGGATCCCCTCTTTATC 72730
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| || || ||||||| | || | |||| | || || || | ||| || ||
Sbjct 72731 TTGGATCTTGGCTTTGACATTTTCGATCGTGTCACTAGGTTCAACCTCTAAAGTGATGGT 72790
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | ||||| ||||||| |||||
Sbjct 72791 CTTGCCAGTCAAGGTCTTAACGAAGATTTGCAT 72823
>seq13894
Length=1211295
Score = 113 bits (124), Expect = 1e-19
Identities = 154/214 (72%), Gaps = 1/214 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTT-TGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|| ||||||||||| || || || ||| |||||||||||||| | || |||| |||||
Sbjct 231733 AGCACAAGATGAAGGGTCGATTCCTTTCTGGATGTTGTAATCTGACAAGGTTCGGCCATC 231792
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || ||| ||||| ||||| | | |||||| |||| | || ||||| || ||
Sbjct 231793 TTCCAGTTGTTTACCGGCAAAGATCAAACGCTGCTGATCCGGAGGAATGCCTTCTTTGTC 231852
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||| ||||| || || | || | | || ||| || |||||||| || || ||
Sbjct 231853 TTGGATTTTCGCCTTCACGTTTTCGATTGTATCGGAAGGTTCGACTTCAAGCGTGATGGT 231912
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || | ||| |||||||| | |||||||
Sbjct 231913 CTTCCCAGTTAAAGTTTTCACGAAAATCTGCATT 231946
Score = 105 bits (116), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||||||||| || |||||||| |||||||||||||||| || || | ||||||
Sbjct 231962 AGTACAAGATGAAGGGTTGACTCTTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCT 232021
Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| | ||||| || |||||||| | | ||||| || | | ||| || || || |
Sbjct 232022 TCCAATTGCTTT--CCCGCGAAGATCAATCGTTGCTGATCTGGTGGGATGCCCTCTTTGT 232079
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
|||| ||||| || || | || | | ||||||| || ||||| | ||| || |
Sbjct 232080 CTTGGATTTTCGCCTTAACGTTTTCAATGGTGTCTGATGGTTCGACTTCCAAAGTGATGG 232139
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| || || | || ||||| || | ||||||
Sbjct 232140 TTTTTCCAGTTAAGGTTTTCACAAAAATCTGCAT 232173
Score = 100 bits (110), Expect = 7e-16
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA--GG 151958
||| ||||| || || || |||||||||||||||| || |||| |||||||| | |
Sbjct 231513 ATGCAGAGTCGATTCCTTCTGGATGTTGTAATCGGACAAGGTTCGGCCATCTTCCAATTG 231572
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|||| || || || || | | || ||||| | | ||| ||||| || || || |||
Sbjct 231573 CTTT--CCCGCAAAAATTAAACGTTGTTGGTCGGGTGGGATGCCTTCTTTGTCCTGGATT 231630
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| |||||| |||| | | |||| || || ||||| || ||||| || || ||
Sbjct 231631 TTCGCCTTGACATTCTCAATGGTGTCCGATGGTTCGACTTCGAGGGTAATGGTCTTTCCG 231690
Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104
|| | ||| |||||||| | ||||||
Sbjct 231691 GTTAAAGTTTTCACGAAAATCTGCAT 231716
Score = 89.7 bits (98), Expect = 1e-12
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955
|| |||||||| || || || || ||||||||||| |||| ||| |||| ||||||||
Sbjct 232193 ACCAGATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGATAAGGTTCGGCCATCTTCC 232252
Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015
| || || || || || | | ||||| |||| | ||| ||||| || || ||
Sbjct 232253 AATTGCTTGCCCGCAAAAATTAATCGTTGCTGATCCGGTGGGATACCTTCTTTATCCTGG 232312
Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075
||||| || || | || | | || ||| ||| ||||| ||||| || || ||
Sbjct 232313 ATTTTCGCCTTCACGTTTTCAATCGTATCGGAAGGCTCGACTTCGAGAGTTATGGTCTTA 232372
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || | || ||||| || | |||||||||
Sbjct 232373 CCGGTTAAGGTTTTCACAAAAATCTGCATTTT 232404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153602908513869
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