Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22] 14,739 sequences; 176,210,797 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq12159 131 2e-25 seq13722 86.0 8e-12 >seq12159 Length=131859 Score = 131 bits (144), Expect = 2e-25 Identities = 203/287 (71%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 ||| || |||| || ||||||||||||||||| |||||||||| | | | |||||| Sbjct 87436 AAATAAGCGTCGTACATTAGCTTCCGATTCACCGACATATTTGTCGAGAATCTGAGGACC 87377 Query 156224 GTTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280 ||||| ||||| || ||| || ||||| | ||| |||| |||||||| | Sbjct 87376 ATTAACAATTTTA--GGTTCGCGAGCGTTTAACATTTTGC-CGATCTGTCGAGCCATAAG 87320 Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAA 156340 |||||| || ||| || || ||| | | | | |||||| | ||||||||||||||| Sbjct 87319 TGTTTTGCCTGTCCCTGGCGGCCCGAAAAGGAGAATTCCTTTAACATGTTTACAACCTAA 87260 Query 156341 TTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGA 156400 || || ||||| |||| | ||| || ||||| || | || |||||| || Sbjct 87259 TTGCTCCACAATTTCAGGAGGAAATACTCTCGATGCAAAAGCACGTCTAAAAATAGCTGA 87200 Query 156401 AAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 ||||||||||||||| || || | ||||| | | |||| ||||| Sbjct 87199 AAATTCTTTATCCAAACCGCCAATTCCCATCTTATTGAAATCCCAAT 87153 >seq13722 Length=82832 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 50667 CCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTTTTATCCTGTCAATGT 50726 ||||| ||||| || || ||||||||| | | | || | ||||| || || Sbjct 63897 CCTCCTTGTCACGTATTGGCTCAATTTTACGTCTCCGATGGCGAATTATCGTGCCAGCTG 63956 Query 50727 TATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTA 50786 || || |||||||||||||||| | || || ||||||||| | ||| ||| | | Sbjct 63957 TACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATCGCTAGCTACTCCCTC 64016 Query 50787 TTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTA 50846 | || | | | | ||||| | || |||| || ||||| |||||||| || ||| Sbjct 64017 CTCACCTGTATCCTGGCTCACGTGACTAATTTGAAGCCTGGAGACTTTATTCACACTTTA 64076 Query 50847 GGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCA 50893 || ||||| ||| ||||| | |||| || ||||| | || ||||| Sbjct 64077 GGCGACGCGCATGTTTACTTGAATCATGTTGATGCGATTAAAGAGCA 64123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666952299732840