Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strigamia_20maritima_20[genbank_20GCA_5F000239455.1_202011-12-22]
14,739 sequences; 176,210,797 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq12159 131 2e-25
seq13722 86.0 8e-12
>seq12159
Length=131859
Score = 131 bits (144), Expect = 2e-25
Identities = 203/287 (71%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223
||| || |||| || ||||||||||||||||| |||||||||| | | | ||||||
Sbjct 87436 AAATAAGCGTCGTACATTAGCTTCCGATTCACCGACATATTTGTCGAGAATCTGAGGACC 87377
Query 156224 GTTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAA 156280
||||| ||||| || ||| || ||||| | ||| |||| |||||||| |
Sbjct 87376 ATTAACAATTTTA--GGTTCGCGAGCGTTTAACATTTTGC-CGATCTGTCGAGCCATAAG 87320
Query 156281 TGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAA 156340
|||||| || ||| || || ||| | | | | |||||| | |||||||||||||||
Sbjct 87319 TGTTTTGCCTGTCCCTGGCGGCCCGAAAAGGAGAATTCCTTTAACATGTTTACAACCTAA 87260
Query 156341 TTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGA 156400
|| || ||||| |||| | ||| || ||||| || | || |||||| ||
Sbjct 87259 TTGCTCCACAATTTCAGGAGGAAATACTCTCGATGCAAAAGCACGTCTAAAAATAGCTGA 87200
Query 156401 AAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447
||||||||||||||| || || | ||||| | | |||| |||||
Sbjct 87199 AAATTCTTTATCCAAACCGCCAATTCCCATCTTATTGAAATCCCAAT 87153
>seq13722
Length=82832
Score = 86.0 bits (94), Expect = 8e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 50667 CCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTTTTATCCTGTCAATGT 50726
||||| ||||| || || ||||||||| | | | || | ||||| || ||
Sbjct 63897 CCTCCTTGTCACGTATTGGCTCAATTTTACGTCTCCGATGGCGAATTATCGTGCCAGCTG 63956
Query 50727 TATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTA 50786
|| || |||||||||||||||| | || || ||||||||| | ||| ||| | |
Sbjct 63957 TACCAGCGATCAGCTGATATGGGACTCGGAGTGCCTTTCAACATCGCTAGCTACTCCCTC 64016
Query 50787 TTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTA 50846
| || | | | | ||||| | || |||| || ||||| |||||||| || |||
Sbjct 64017 CTCACCTGTATCCTGGCTCACGTGACTAATTTGAAGCCTGGAGACTTTATTCACACTTTA 64076
Query 50847 GGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCA 50893
|| ||||| ||| ||||| | |||| || ||||| | || |||||
Sbjct 64077 GGCGACGCGCATGTTTACTTGAATCATGTTGATGCGATTAAAGAGCA 64123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666952299732840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |