Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value SEQ11801 113 5e-20 SEQ23413 98.7 1e-15 SEQ14824 96.9 4e-15 >SEQ11801 Length=23874 Score = 113 bits (124), Expect = 5e-20 Identities = 132/177 (75%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || || || | | ||| ||||||||||| || | ||||||||| || || ||| Sbjct 19986 ATATAGGTGTCAATCAAGATGCTATACATTTCGGAATGGACGTTCTCCATAGCAATTTGA 19927 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| ||||||| ||||| || | ||||||||| | ||| || ||| ||| | Sbjct 19926 AATCCGTAGAAGCATCTAGCTTCAGCAACTTGAACTTCTTTGCTGAAGCGCTCCACTAAA 19867 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAA 17410 || ||||| || || || || || || || || || || |||||||||| |||| Sbjct 19866 TTCTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAA-GAAA 19811 Score = 96.9 bits (106), Expect = 4e-15 Identities = 214/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || |||||||||||||||||| |||| | || ||| ||||| || | ||| || Sbjct 20477 ATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAGGAGATTAAC 20418 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 | | |||| | || | || || || || ||| || || | ||||| | Sbjct 20417 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 20358 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || |||| || || || || | |||| |||||| || ||||| || || || Sbjct 20357 AATACGTTGCTTAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATGCAAAGTCACA 20298 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||||||||||| || | || | ||| ||||||||||| || || ||| | || Sbjct 20297 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCATGCAAGATGCC 20238 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 |||| ||||||||| || || || || || ||| || |||||||| || || | Sbjct 20237 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACCGC 20178 Query 17098 TGCAAACGCGATTAATCGTTC 17118 ||||| || || | ||||| Sbjct 20177 AGCAAAAGCAATGATACGTTC 20157 >SEQ23413 Length=15718 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 17236 ATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAA 17295 ||| || || || | | ||| |||||||| || || | || || || ||||| ||||| Sbjct 1118 ATAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAA 1177 Query 17296 TCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATT 17355 |||||| ||||||| ||||| | | ||||||||| | ||| || ||| ||| ||| Sbjct 1178 TCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATT 1237 Query 17356 TTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 ||||| || || || || || || || || || || ||||||||||| ||||| Sbjct 1238 CTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAATA 1294 Score = 96.9 bits (106), Expect = 4e-15 Identities = 214/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || |||||||| |||||||| |||| | || ||| ||||| || | ||| || Sbjct 624 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 683 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 | | |||| | || | || || || || ||| || || | ||||| | Sbjct 684 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 743 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || |||| || || || || | ||||| |||||| || ||||| || || || Sbjct 744 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 803 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||||||||||| || | || | ||| ||||||||||| || || |||| | || Sbjct 804 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 863 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 |||| ||||||||| || || || || || ||| || |||||||| || || | Sbjct 864 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 923 Query 17098 TGCAAACGCGATTAATCGTTC 17118 ||||| || || | ||||| Sbjct 924 AGCAAAAGCAATGATACGTTC 944 >SEQ14824 Length=19491 Score = 96.9 bits (106), Expect = 4e-15 Identities = 214/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || |||||||| |||||||| |||| | || ||| ||||| || | ||| || Sbjct 4960 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 5019 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 | | |||| | || | || || || || ||| || || | ||||| | Sbjct 5020 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 5079 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || |||| || || || || | ||||| |||||| || ||||| || || || Sbjct 5080 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 5139 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||||||||||| || | || | ||| ||||||||||| || || |||| | || Sbjct 5140 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 5199 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 |||| ||||||||| || || || || || ||| || |||||||| || || | Sbjct 5200 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 5259 Query 17098 TGCAAACGCGATTAATCGTTC 17118 ||||| || || | ||||| Sbjct 5260 AGCAAAAGCAATGATACGTTC 5280 Score = 96.9 bits (106), Expect = 4e-15 Identities = 214/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || |||||||| |||||||| |||| | || ||| ||||| || | ||| || Sbjct 11759 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 11818 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 | | |||| | || | || || || || ||| || || | ||||| | Sbjct 11819 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 11878 Query 16918 AACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCA 16977 || |||| || || || || | ||||| |||||| || ||||| || || || Sbjct 11879 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 11938 Query 16978 ATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCC 17037 |||||||||||| || | || | ||| ||||||||||| || || |||| | || Sbjct 11939 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 11998 Query 17038 TCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGA 17097 |||| ||||||||| || || || || || ||| || |||||||| || || | Sbjct 11999 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATACCTTCAACAGC 12058 Query 17098 TGCAAACGCGATTAATCGTTC 17118 ||||| || || | ||||| Sbjct 12059 AGCAAAAGCAATGATACGTTC 12079 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 17236 ATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAA 17295 ||| || || || | | ||| |||||||| || || | || || || ||||| ||||| Sbjct 5454 ATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAA 5513 Query 17296 TCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATT 17355 |||||| ||||||| ||||| | | ||||||||| | ||| || ||| ||| ||| Sbjct 5514 TCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATT 5573 Query 17356 TTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 ||||| || || || || || || || || || || ||||||||||| || || Sbjct 5574 CTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTA 5630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 17236 ATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAA 17295 ||| || || || | | ||| |||||||| || || | || || || ||||| ||||| Sbjct 12253 ATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAA 12312 Query 17296 TCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATT 17355 |||||| ||||||| ||||| | | ||||||||| | ||| || ||| ||| ||| Sbjct 12313 TCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATT 12372 Query 17356 TTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 ||||| || || || || || || || || || || ||||||||||| || || Sbjct 12373 CTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTA 12429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517382948356560