Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23413 109 6e-19
SEQ14824 109 6e-19
SEQ11801 100 3e-16
SEQ20260 89.7 5e-13
SEQ20258 89.7 5e-13
seq3264 89.7 5e-13
>SEQ23413
Length=15718
Score = 109 bits (120), Expect = 6e-19
Identities = 279/423 (66%), Gaps = 4/423 (1%)
Strand=Plus/Plus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTAC 16095
||| || |||||||| ||||||||| |||| | | |||||| || || | || ||
Sbjct 624 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 683
Query 16096 CGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGT 16155
| | |||| |||| || | || ||| || ||| || ||| | || || || |
Sbjct 684 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 743
Query 16156 GGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCA 16215
||| | ||| || || | |||| |||||| || || || ||||| ||
Sbjct 744 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 803
Query 16216 ATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCC 16275
||||| ||| || || | || | ||| || ||||| ||||| || |||| | ||
Sbjct 804 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 863
Query 16276 TCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACA 16333
|||| |||||||||||| || |||||||| | | | |||| |||||||| ||||||
Sbjct 864 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAA--AATATACCTTCAACA 921
Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGT 16393
| |||||||| || | ||||| | | | ||| |||| | |||||| ||
Sbjct 922 GCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGT 981
Query 16394 ACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCT 16453
||||||| || || | |||| ||| || || || || |||||||| | ||||
Sbjct 982 GCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCT 1041
Query 16454 TTT 16456
||
Sbjct 1042 CTT 1044
Score = 104 bits (114), Expect = 2e-17
Identities = 129/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533
||| || ||||||| | || ||||||||||| || | || || || ||||| |||||
Sbjct 1118 ATAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAA 1177
Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593
||| |||||||||| ||| || | | ||| ||||| | || || ||| | | ||
Sbjct 1178 TCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATT 1237
Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATA 16650
||| || || ||||| ||| |||||||| || || || || |||||||| |||||
Sbjct 1238 CTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAATA 1294
>SEQ14824
Length=19491
Score = 109 bits (120), Expect = 6e-19
Identities = 279/423 (66%), Gaps = 4/423 (1%)
Strand=Plus/Plus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTAC 16095
||| || |||||||| ||||||||| |||| | | |||||| || || | || ||
Sbjct 4960 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 5019
Query 16096 CGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGT 16155
| | |||| |||| || | || ||| || ||| || ||| | || || || |
Sbjct 5020 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 5079
Query 16156 GGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCA 16215
||| | ||| || || | |||| |||||| || || || ||||| ||
Sbjct 5080 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 5139
Query 16216 ATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCC 16275
||||| ||| || || | || | ||| || ||||| ||||| || |||| | ||
Sbjct 5140 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 5199
Query 16276 TCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACA 16333
|||| |||||||||||| || |||||||| | | | |||| |||||||| ||||||
Sbjct 5200 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAA--AATATACCTTCAACA 5257
Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGT 16393
| |||||||| || | ||||| | | | ||| |||| | |||||| ||
Sbjct 5258 GCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGT 5317
Query 16394 ACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCT 16453
||||||| || || | |||| ||| || || || || |||||||| | ||||
Sbjct 5318 GCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCT 5377
Query 16454 TTT 16456
||
Sbjct 5378 CTT 5380
Score = 109 bits (120), Expect = 6e-19
Identities = 279/423 (66%), Gaps = 4/423 (1%)
Strand=Plus/Plus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTAC 16095
||| || |||||||| ||||||||| |||| | | |||||| || || | || ||
Sbjct 11759 ATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTCATACCAAGGAGATTAAC 11818
Query 16096 CGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGT 16155
| | |||| |||| || | || ||| || ||| || ||| | || || || |
Sbjct 11819 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 11878
Query 16156 GGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCA 16215
||| | ||| || || | |||| |||||| || || || ||||| ||
Sbjct 11879 AATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACATAAGGCATGCAAAGTCACA 11938
Query 16216 ATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCC 16275
||||| ||| || || | || | ||| || ||||| ||||| || |||| | ||
Sbjct 11939 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAGGCAAGATGCC 11998
Query 16276 TCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACA 16333
|||| |||||||||||| || |||||||| | | | |||| |||||||| ||||||
Sbjct 11999 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAA--AATATACCTTCAACA 12056
Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGT 16393
| |||||||| || | ||||| | | | ||| |||| | |||||| ||
Sbjct 12057 GCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGAAGAAATCCAAGATAGT 12116
Query 16394 ACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCT 16453
||||||| || || | |||| ||| || || || || |||||||| | ||||
Sbjct 12117 GCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGCATTAAACAAATGCTCT 12176
Query 16454 TTT 16456
||
Sbjct 12177 CTT 12179
Score = 98.7 bits (108), Expect = 1e-15
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533
||| || ||||||| | || ||||||||||| || | || || || ||||| |||||
Sbjct 5454 ATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAA 5513
Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593
||| |||||||||| ||| || | | ||| ||||| | || || ||| | | ||
Sbjct 5514 TCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATT 5573
Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATA 16650
||| || || ||||| ||| |||||||| || || || || |||||||| || ||
Sbjct 5574 CTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTA 5630
Score = 98.7 bits (108), Expect = 1e-15
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533
||| || ||||||| | || ||||||||||| || | || || || ||||| |||||
Sbjct 12253 ATAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAA 12312
Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593
||| |||||||||| ||| || | | ||| ||||| | || || ||| | | ||
Sbjct 12313 TCCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATT 12372
Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATA 16650
||| || || ||||| ||| |||||||| || || || || |||||||| || ||
Sbjct 12373 CTCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTA 12429
>SEQ11801
Length=23874
Score = 100 bits (110), Expect = 3e-16
Identities = 217/323 (67%), Gaps = 4/323 (1%)
Strand=Plus/Minus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTAC 16095
||| || ||||||||||||||||| |||| | | |||||| || || | || ||
Sbjct 20477 ATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAGGAGATTAAC 20418
Query 16096 CGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGT 16155
| | |||| |||| || | || ||| || ||| || ||| | || || || |
Sbjct 20417 AGACAAAGCTACAGTTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTATAATTTCAAT 20358
Query 16156 GGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCA 16215
||| | ||| || || | ||||| |||||| || || || ||||| ||
Sbjct 20357 AATACGTTGCTTAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATGCAAAGTCACA 20298
Query 16216 ATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCC 16275
||||| ||| || || | || | ||| || ||||| ||||| || ||| | ||
Sbjct 20297 ATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCATGCAAGATGCC 20238
Query 16276 TCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACA 16333
|||| |||||||||||| || |||||||| | | | |||| |||||||| |||||
Sbjct 20237 ACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAA--AATATACCTTCAACC 20180
Query 16334 GATGCAAAAGCGATTAATCGTTC 16356
| |||||||| || | |||||
Sbjct 20179 GCAGCAAAAGCAATGATACGTTC 20157
>SEQ20260
Length=19963
Score = 89.7 bits (98), Expect = 5e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 119088 TTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTG 119147
||| ||||| | ||||||| ||||||||||||||||| ||||| |||| | | |||||
Sbjct 2233 TTCAGGAGTTTCTGTCCATTCAAGTATTTTTTTAGCCCAATACATCCGTAGAAAACCGTG 2174
Query 119148 CATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACG 119207
|||||| || || || || | || | ||||| | |||||||| ||| || |||||
Sbjct 2173 CATTTTGCCTTCATTGATTAATTGTAACTGTGCAGAGTTCCATAAGTCATCATGCGTACG 2114
Query 119208 GGCGTGTTCTAA 119219
|| || || ||
Sbjct 2113 AGCCTGCTCAAA 2102
>SEQ20258
Length=134083
Score = 89.7 bits (98), Expect = 5e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 119088 TTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTG 119147
||| ||||| | ||||||| ||||||||||||||||| ||||| |||| | | |||||
Sbjct 132391 TTCAGGAGTTTCTGTCCATTCAAGTATTTTTTTAGCCCAATACATTCGTAGAAAACCGTG 132332
Query 119148 CATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACG 119207
|||||| || || || || | || | ||||| | |||||||| ||| || |||||
Sbjct 132331 CATTTTGCCTTCATTGATTAATTGTAACTGTGCAGAGTTCCATAAGTCATCATGCGTACG 132272
Query 119208 GGCGTGTTCTAA 119219
|| || || ||
Sbjct 132271 AGCCTGCTCAAA 132260
>seq3264
Length=23417
Score = 89.7 bits (98), Expect = 5e-13
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 119088 TTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTG 119147
||| ||||| | ||||||| ||||||||||||||||| ||||| |||| | | |||||
Sbjct 18615 TTCAGGAGTTTCTGTCCATTCAAGTATTTTTTTAGCCCAATACATTCGTAGAAAACCGTG 18674
Query 119148 CATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACG 119207
|||||| || || || || | || | ||||| | |||||||| ||| || |||||
Sbjct 18675 CATTTTGCCTTCATTGATTAATTGTAACTGTGCAGAGTTCCATAAGTCATCATGCGTACG 18734
Query 119208 GGCGTGTTCTAA 119219
|| || || ||
Sbjct 18735 AGCCTGCTCAAA 18746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511253675239440
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