Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value SEQ19926 199 3e-46 >SEQ19926 Length=251428 Score = 199 bits (220), Expect = 3e-46 Identities = 540/814 (66%), Gaps = 28/814 (3%) Strand=Plus/Plus Query 18564 GGAACGTTATCTTTATTTGGAATGCAAGCTCGATACAATTTGCGAAATGAATTTCCTCTT 18623 || || || ||| | ||||| | ||| || | ||| || |||| | ||||| || Sbjct 63675 GGTACCTTTTCTATTTTTGGCACACAAATGCGTTTCAACATGAGAAAAGGGTTTCCGCTA 63734 Query 18624 TTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGC 18683 || || || || |||||||||||| | || || || || |||||| | |||||||| Sbjct 63735 TTGACAACTAAACGTGTTTTTTGGCGTGCTGTTGTAGAGGAGTTGCTGTGGTTTATAAAA 63794 Query 18684 GGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGA 18743 || ||||| ||| | | | | | ||| ||||||| || |||||| | | Sbjct 63795 GGATCAACAGATGCGCAGCTATTGCAAGATAAGAATATACATATTTGGGATGGGAATAGT 63854 Query 18744 TCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCC 18803 || | |||| || ||| ||| || || || | | || || | || || Sbjct 63855 TCCCGTGCATTTTTAGATAAACTTGGTTTACACGAACGTGAAGAAGGCGATTTAGGACCA 63914 Query 18804 ATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTAT 18863 |||| ||||| || ||| | ||||| || || |||||||| || |||| ||| | Sbjct 63915 GTTTATGGCTTTCAATGGCGTCATTTCGGTGCAGAATATAAGGATCGTCA-TCA---TGA 63970 Query 18864 TTACAGCAAGGAA----TCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCC 18919 ||||||||| ||| | ||||| || ||| ||||| ||||| || ||||| || Sbjct 63971 TTACAGCAATGAAGGTATTGATCAACTTAAAAACGTTATTGATACTATACGTACAAATCC 64030 Query 18920 AGAAAGCCGACGAATGATTATATCGTCT---TGGAATCCAAAGGATATCCCCTTAATGGT 18976 | || | ||| ||||||| |||| ||||||||| ||||| || ||||| Sbjct 64031 A--AATGATA-GAAGGATTATAATGTCTGCATGGAATCCATGTGATATACCTAAAATGGC 64087 Query 18977 ACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCA 19036 |||||| ||||| || ||| |||||||| ||| || |||| ||| ||||| || || Sbjct 64088 ACTACCACCATGCCATTGTTTAGCTCAGTTTTTCGTAGCTAACGATGAGTTATCTTGTCA 64147 Query 19037 AGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGC 19096 | |||| ||| | | |||||||| ||||| || || || || ||||| ||||| Sbjct 64148 ACTATATCAGCGCAGTGCTGATATGGGTCTTGGTGTTCCATTTAATATTGCCTCTTATGC 64207 Query 19097 ACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAATTCATA 19155 | ||||| | || | ||||||||||| ||| ||||| || || ||| | || | Sbjct 64208 TTTACTTACGCATATGATTGCGCATGTTACGGGA-TTAAAGCCTGGTTGTTTTGTACACA 64266 Query 19156 CAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTC 19215 | ||||| ||| | ||| | || ||||||| | || ||||||| | ||| || | Sbjct 64267 CTATGGGTGATACGCATGTATATAAGAATCATGTCGAACCTTTAAAGGAGCAACTTAAAC 64326 Query 19216 GATCCCCAAAACCTTTTCC----TTGCCT-TAAAATTATTCGAAATGTAACAGATATAAA 19270 | |||| | ||||||| |||| | ||||| || | |||| | ||| | Sbjct 64327 GTATTCCAAGAGCTTTTCCAAAATTGCTTATAAAA-----CGTGAAGTAAAAAGTATTGA 64381 Query 19271 CGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAAT 19330 || |||| | || |||||| | | ||| ||||||||| | || | |||| Sbjct 64382 AGATTTTACCTTTGATGATTTTGAAATAATTGGCTATAATCCATATCCTAAAATCCAAAT 64441 Query 19331 GGAAATGGCTCTTTAA-TGGATTTTTA-AATGTT 19362 ||| |||||| ||||| || ||||||| |||||| Sbjct 64442 GGAGATGGCTGTTTAATTGCATTTTTATAATGTT 64475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399381584733390