Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19926 199 3e-46
>SEQ19926
Length=251428
Score = 199 bits (220), Expect = 3e-46
Identities = 540/814 (66%), Gaps = 28/814 (3%)
Strand=Plus/Plus
Query 18564 GGAACGTTATCTTTATTTGGAATGCAAGCTCGATACAATTTGCGAAATGAATTTCCTCTT 18623
|| || || ||| | ||||| | ||| || | ||| || |||| | ||||| ||
Sbjct 63675 GGTACCTTTTCTATTTTTGGCACACAAATGCGTTTCAACATGAGAAAAGGGTTTCCGCTA 63734
Query 18624 TTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGC 18683
|| || || || |||||||||||| | || || || || |||||| | ||||||||
Sbjct 63735 TTGACAACTAAACGTGTTTTTTGGCGTGCTGTTGTAGAGGAGTTGCTGTGGTTTATAAAA 63794
Query 18684 GGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGA 18743
|| ||||| ||| | | | | | ||| ||||||| || |||||| | |
Sbjct 63795 GGATCAACAGATGCGCAGCTATTGCAAGATAAGAATATACATATTTGGGATGGGAATAGT 63854
Query 18744 TCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACCTTGGCCCC 18803
|| | |||| || ||| ||| || || || | | || || | || ||
Sbjct 63855 TCCCGTGCATTTTTAGATAAACTTGGTTTACACGAACGTGAAGAAGGCGATTTAGGACCA 63914
Query 18804 ATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTAT 18863
|||| ||||| || ||| | ||||| || || |||||||| || |||| ||| |
Sbjct 63915 GTTTATGGCTTTCAATGGCGTCATTTCGGTGCAGAATATAAGGATCGTCA-TCA---TGA 63970
Query 18864 TTACAGCAAGGAA----TCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCC 18919
||||||||| ||| | ||||| || ||| ||||| ||||| || ||||| ||
Sbjct 63971 TTACAGCAATGAAGGTATTGATCAACTTAAAAACGTTATTGATACTATACGTACAAATCC 64030
Query 18920 AGAAAGCCGACGAATGATTATATCGTCT---TGGAATCCAAAGGATATCCCCTTAATGGT 18976
| || | ||| ||||||| |||| ||||||||| ||||| || |||||
Sbjct 64031 A--AATGATA-GAAGGATTATAATGTCTGCATGGAATCCATGTGATATACCTAAAATGGC 64087
Query 18977 ACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCA 19036
|||||| ||||| || ||| |||||||| ||| || |||| ||| ||||| || ||
Sbjct 64088 ACTACCACCATGCCATTGTTTAGCTCAGTTTTTCGTAGCTAACGATGAGTTATCTTGTCA 64147
Query 19037 AGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGC 19096
| |||| ||| | | |||||||| ||||| || || || || ||||| |||||
Sbjct 64148 ACTATATCAGCGCAGTGCTGATATGGGTCTTGGTGTTCCATTTAATATTGCCTCTTATGC 64207
Query 19097 ACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAATTCATA 19155
| ||||| | || | ||||||||||| ||| ||||| || || ||| | || |
Sbjct 64208 TTTACTTACGCATATGATTGCGCATGTTACGGGA-TTAAAGCCTGGTTGTTTTGTACACA 64266
Query 19156 CAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCTAGCTC 19215
| ||||| ||| | ||| | || ||||||| | || ||||||| | ||| || |
Sbjct 64267 CTATGGGTGATACGCATGTATATAAGAATCATGTCGAACCTTTAAAGGAGCAACTTAAAC 64326
Query 19216 GATCCCCAAAACCTTTTCC----TTGCCT-TAAAATTATTCGAAATGTAACAGATATAAA 19270
| |||| | ||||||| |||| | ||||| || | |||| | ||| |
Sbjct 64327 GTATTCCAAGAGCTTTTCCAAAATTGCTTATAAAA-----CGTGAAGTAAAAAGTATTGA 64381
Query 19271 CGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccccTAAAAAT 19330
|| |||| | || |||||| | | ||| ||||||||| | || | ||||
Sbjct 64382 AGATTTTACCTTTGATGATTTTGAAATAATTGGCTATAATCCATATCCTAAAATCCAAAT 64441
Query 19331 GGAAATGGCTCTTTAA-TGGATTTTTA-AATGTT 19362
||| |||||| ||||| || ||||||| ||||||
Sbjct 64442 GGAGATGGCTGTTTAATTGCATTTTTATAATGTT 64475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399381584733390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |