Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19926 206 2e-48
>SEQ19926
Length=251428
Score = 206 bits (228), Expect = 2e-48
Identities = 390/562 (69%), Gaps = 20/562 (4%)
Strand=Plus/Minus
Query 101753 GTGACATGAGCAATCAT----GCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCAC 101808
|| ||||| |||||||| | |||| ||| | || || ||||| |||||||| ||
Sbjct 64237 GTAACATGCGCAATCATATGCGTAAGT-AAAGCATAAGAG---GCAATATTAAATGGAAC 64182
Query 101809 TCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGAC 101868
|| | ||||||||||| | ||||| |||||||| || | || | | | ||
Sbjct 64181 ACCAAGACCCATATCAGCACTGCGCTGATATAGTTGACAAGATAACTCATCGTTAGCTAC 64122
Query 101869 ATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATT 101928
|||| ||| ||| ||| || || || | |||||||||| || || | |||
Sbjct 64121 GAAAAACTGAGCTAAACAATGGCATGGTGGTAGTGCCATTTTAGGTATATCACATGGATT 64062
Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTG 101988
||| ||| |||||| ||||||||||| | || ||||| |||||||||||| |||
Sbjct 64061 CCATGCAGACATTATAATCCTTCTATCATTTGGATTTGTACGTATAGTATCAAT-AACGT 64003
Query 101989 TTTTAA-TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTC 102047
|||||| ||| |||| ||||| | ||||| | | | | ||||||||||| |
Sbjct 64002 TTTTAAGTTGATCAATACCTTCATTGCTGTAATCATGATGACGATCCTTATATTCTGCAC 63943
Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAA 102107
||||||| | ||| ||||| ||||| || ||||| | ||| ||||| || | || | |
Sbjct 63942 CGAAATGACGCCATTGAAAGCCATAAACTGGTCCTAAATCGCCTTCTTCACGTTCGTGTA 63883
Query 102108 AACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA---CGCCAG 102164
||||||||||||||||||||| | || | |||| |||||||||| || | |
Sbjct 63882 AACCAAGTTTATCTAAAAATGCACGGGAACTATTCCCATCCCAAATATGTATATTCTTAT 63823
Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224
|| |||| || || || || |||||| | |||||||||| || || || ||||
Sbjct 63822 CTTGCAATAG--CTGCGC-ATCTGTTGATCCTTTTATAAACCACAGCAACTCCTCTACAA 63766
Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCATTTTCTAAACT--AAA 102282
|| | | |||||| || | ||||| || || || ||||| | |||||| | | |||
Sbjct 63765 CAGCACGCCAAAAAACACGTTTAGTTGTCAATAGCGGAAA-CCCTTTTCTCATGTTGAAA 63707
Query 102283 CCTAGACTGTGTTCCAAAAATA 102304
| | ||||| |||||||||
Sbjct 63706 CGCA-TTTGTGTGCCAAAAATA 63686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361140506084642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |