Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value SEQ19926 206 2e-48 >SEQ19926 Length=251428 Score = 206 bits (228), Expect = 2e-48 Identities = 390/562 (69%), Gaps = 20/562 (4%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCAT----GCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCAC 101808 || ||||| |||||||| | |||| ||| | || || ||||| |||||||| || Sbjct 64237 GTAACATGCGCAATCATATGCGTAAGT-AAAGCATAAGAG---GCAATATTAAATGGAAC 64182 Query 101809 TCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGAC 101868 || | ||||||||||| | ||||| |||||||| || | || | | | || Sbjct 64181 ACCAAGACCCATATCAGCACTGCGCTGATATAGTTGACAAGATAACTCATCGTTAGCTAC 64122 Query 101869 ATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATT 101928 |||| ||| ||| ||| || || || | |||||||||| || || | ||| Sbjct 64121 GAAAAACTGAGCTAAACAATGGCATGGTGGTAGTGCCATTTTAGGTATATCACATGGATT 64062 Query 101929 CCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTG 101988 ||| ||| |||||| ||||||||||| | || ||||| |||||||||||| ||| Sbjct 64061 CCATGCAGACATTATAATCCTTCTATCATTTGGATTTGTACGTATAGTATCAAT-AACGT 64003 Query 101989 TTTTAA-TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTC 102047 |||||| ||| |||| ||||| | ||||| | | | | ||||||||||| | Sbjct 64002 TTTTAAGTTGATCAATACCTTCATTGCTGTAATCATGATGACGATCCTTATATTCTGCAC 63943 Query 102048 CGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAA 102107 ||||||| | ||| ||||| ||||| || ||||| | ||| ||||| || | || | | Sbjct 63942 CGAAATGACGCCATTGAAAGCCATAAACTGGTCCTAAATCGCCTTCTTCACGTTCGTGTA 63883 Query 102108 AACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA---CGCCAG 102164 ||||||||||||||||||||| | || | |||| |||||||||| || | | Sbjct 63882 AACCAAGTTTATCTAAAAATGCACGGGAACTATTCCCATCCCAAATATGTATATTCTTAT 63823 Query 102165 CTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 || |||| || || || || |||||| | |||||||||| || || || |||| Sbjct 63822 CTTGCAATAG--CTGCGC-ATCTGTTGATCCTTTTATAAACCACAGCAACTCCTCTACAA 63766 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAATTCATTTTCTAAACT--AAA 102282 || | | |||||| || | ||||| || || || ||||| | |||||| | | ||| Sbjct 63765 CAGCACGCCAAAAAACACGTTTAGTTGTCAATAGCGGAAA-CCCTTTTCTCATGTTGAAA 63707 Query 102283 CCTAGACTGTGTTCCAAAAATA 102304 | | ||||| ||||||||| Sbjct 63706 CGCA-TTTGTGTGCCAAAAATA 63686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361140506084642