Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 122 7e-23 >SEQ18352 Length=541547 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| ||||| ||||||| ||||| || |||||||| || ||| ||| | | Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || ||||||||| | || ||||||| Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || |||||||| ||||||||||| |||||| ||| | |||| ||||| Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||||||||||||| | || |||||||||| |||| || || Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTTACGTCTACGTGGTGG 399920 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||| |||||||||||||| || || || | Sbjct 390753 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 390812 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| ||||| ||||||||||| | ||| ||||||| Sbjct 390813 GACACCATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 390872 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | | |||||||| ||||||||||| |||||| ||| || |||| ||||| Sbjct 390873 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTTTGTCCGACTACAAC 390932 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||| | || |||| || || ||||| || || Sbjct 390933 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTTTACGTGGTGG 390979 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| ||||| | ||||| |||| ||||| |||||||| ||| ||||| | Sbjct 401062 ATGCAGATATTTGTTAAAACCCTGACCGGCAAGACCATTACACTAGAAGTCGAACCATCT 401121 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | | ||| |||||| || ||||| || | || ||| ||| Sbjct 401122 GATAGTATTGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGACCAA 401181 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | | || ||||| || |||||| |||||||| || | || | ||||||||| Sbjct 401182 CAACGTTTGATATTTGCTGGTAAACAATTGGAAGATGGTCGCACCCTCT--CCGATTACA 401239 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||||||||||||||| | || |||| ||||| |||| || || Sbjct 401240 ATATTCAGAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGG 401288 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| | || ||||| || ||||||||||| || || |||||| Sbjct 399235 AAAATGCAGATCTTCGTGAAGACATTAACAGGCAAAACCATCACTTTGGAGGTGGAACCA 399294 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || | | | || ||||| ||||||| || |||||||| | || |||| Sbjct 399295 TCTGATAGCATCGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCACCAGAT 399354 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATT 29136 |||||| | | || ||||| || || ||||| |||||| || | || | | |||| Sbjct 399355 CAACAACGCTTAATATTTGCTGGTAAGCAACTTGAAGATGGTCGCACCCTTT--CTGATT 399412 Query 29137 ACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 | || || || || ||||| ||| | ||| |||| | || |||||||| ||| Sbjct 399413 ATAACATACAAAAAGAATCCACTTTACACTTGGTCCTTCGTTTACGAGGTGGG 399465 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| ||||||||||| || || || || | Sbjct 389385 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 389444 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || ||| || ||||||||| | || ||||||| Sbjct 389445 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 389504 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | |||||||| ||||||||||| |||||| ||| | |||||||||| Sbjct 389505 CAACGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 389564 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||| | || |||| || || |||| || || Sbjct 389565 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 389611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| ||||| | ||||| ||||| |||||||||||||| ||| ||| | | Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | | ||| |||||| ||||||||||| | || ||| ||| Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | | || || || || |||||| |||||||| || | || | | || |||| Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCT--CTGACTACA 402151 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 | || ||||| ||||| || ||||| |||| ||||| |||| || || Sbjct 402152 ACATACAGAAAGAATCCACACTTCATTTGGTATTACGCCTACGTGGCGG 402200 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| || | ||||| ||||| || ||||||||||| ||| || || Sbjct 388926 AACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAGCCA 388985 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || | ||| |||||| ||||| |||||| | || ||| Sbjct 388986 TCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCAGAC 389045 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | | || ||||| || || ||| |||| ||| || | |||| ||| Sbjct 389046 CAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGACTAC 389105 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| |||||||| ||||| ||| |||| || || |||| || || Sbjct 389106 AACATTCAAAAGGAATCAACTCTCCACTTGGTCTTGCGTCTACGTGGTGG 389155 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| |||||||||||||| || ||||| | Sbjct 389841 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAGGTTGAACCATCT 389900 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| ||||| || |||||||| | || |||||| Sbjct 389901 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCAGATCAG 389960 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | | || || || ||||| || || |||||| ||| || |||| ||||| Sbjct 389961 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCCGACTACAAC 390020 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| ||||||||||| ||| |||| || || |||| || || Sbjct 390021 ATCCAGAAAGAATCTACTCTCCACTTGGTCTTGCGTCTACGTGGTGG 390067 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || ||||| ||||||||||| || || || || | Sbjct 390525 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 390584 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || ||| || ||||||||| | || ||||||| Sbjct 390585 GACACTATTGAAAATGTGAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 390644 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | | |||||||| ||||||||||| |||||| ||| | |||||||||| Sbjct 390645 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 390704 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||| | || |||| || || |||| || || Sbjct 390705 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 390751 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || || ||||| |||||||| || ||| || ||||| | Sbjct 399922 ATGCAGATTTTTGTAAAGACTTTGACAGGCAAAACTATCACCTTAGAGGTCGAACCATCT 399981 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | ||||| |||||| || ||||| || | || ||||||| Sbjct 399982 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400041 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || |||||| |||||||| ||| | |||||||||| Sbjct 400042 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400101 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 |||||||||||||| || ||||| |||| ||||| Sbjct 400102 ATTCAGAAGGAATCCACACTTCATTTGGTATTACG 400136 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| ||||| | ||||| ||||| |||||||| ||||| ||| ||| | | Sbjct 400150 ATGCAGATATTTGTTAAAACCTTGACTGGCAAAACTATTACATTGGAAGTCGAAGCATCT 400209 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | | ||| || ||| |||||||| || | || ||| ||| Sbjct 400210 GACACGATTGAGAACGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCTCCAGACCAA 400269 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || || || || |||||| |||||||| || | | ||||||||| Sbjct 400270 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTCTCTGATTACAAT 400329 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| |||||||||||| | || |||| ||||| |||| || || Sbjct 400330 ATTCAAAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGG 400376 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || || || |||||||| || ||| || ||||| | Sbjct 400378 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 400437 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | ||||| |||||| || ||||| || | || ||||||| Sbjct 400438 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400497 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || |||||| |||||||| ||| | |||||||||| Sbjct 400498 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400557 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 |||||||||||||| || ||||| |||| ||||| Sbjct 400558 ATTCAGAAGGAATCCACACTTCATTTGGTATTACG 400592 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || || || |||||||| || ||| || ||||| | Sbjct 400834 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 400893 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | ||||| |||||| || ||||| || | || ||||||| Sbjct 400894 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400953 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || |||||| |||||||| ||| | ||||||| ||| Sbjct 400954 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTCTCCGATTATAAT 401013 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| |||||||||||| | || |||| ||||| |||| || || Sbjct 401014 ATTCAAAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGG 401060 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | || || || || |||||||| || ||| || ||||| | Sbjct 401290 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 401349 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || | | | | ||||| |||||| || ||||| || | || ||||||| Sbjct 401350 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 401409 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || |||||| |||||||| ||| | |||||||||| Sbjct 401410 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 401469 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 |||||||||||||| || ||||| |||| ||||| Sbjct 401470 ATTCAGAAGGAATCCACACTTCATTTGGTATTACG 401504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428204750086010