Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 122 7e-23
>SEQ18352
Length=541547
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| ||||| ||||||| ||||| || |||||||| || ||| ||| | |
Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | || |||||| || ||||||||| | || |||||||
Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | || |||||||| ||||||||||| |||||| ||| | |||| |||||
Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||||||||||||| | || |||||||||| |||| || ||
Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTTACGTCTACGTGGTGG 399920
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| |||| || ||||| |||||||||||||| || || || |
Sbjct 390753 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 390812
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || ||||| ||||| ||||||||||| | ||| |||||||
Sbjct 390813 GACACCATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCAA 390872
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| | | |||||||| ||||||||||| |||||| ||| || |||| |||||
Sbjct 390873 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTTTGTCCGACTACAAC 390932
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||||||| | || |||| || || ||||| || ||
Sbjct 390933 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTTTACGTGGTGG 390979
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| ||||| | ||||| |||| ||||| |||||||| ||| ||||| |
Sbjct 401062 ATGCAGATATTTGTTAAAACCCTGACCGGCAAGACCATTACACTAGAAGTCGAACCATCT 401121
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| | | | | | ||| |||||| || ||||| || | || ||| |||
Sbjct 401122 GATAGTATTGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGACCAA 401181
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139
||| | | || ||||| || |||||| |||||||| || | || | |||||||||
Sbjct 401182 CAACGTTTGATATTTGCTGGTAAACAATTGGAAGATGGTCGCACCCTCT--CCGATTACA 401239
Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||||||||||||||| | || |||| ||||| |||| || ||
Sbjct 401240 ATATTCAGAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGG 401288
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| || ||| | || ||||| || ||||||||||| || || ||||||
Sbjct 399235 AAAATGCAGATCTTCGTGAAGACATTAACAGGCAAAACCATCACTTTGGAGGTGGAACCA 399294
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || | | | || ||||| ||||||| || |||||||| | || ||||
Sbjct 399295 TCTGATAGCATCGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCACCAGAT 399354
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATT 29136
|||||| | | || ||||| || || ||||| |||||| || | || | | ||||
Sbjct 399355 CAACAACGCTTAATATTTGCTGGTAAGCAACTTGAAGATGGTCGCACCCTTT--CTGATT 399412
Query 29137 ACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189
| || || || || ||||| ||| | ||| |||| | || |||||||| |||
Sbjct 399413 ATAACATACAAAAAGAATCCACTTTACACTTGGTCCTTCGTTTACGAGGTGGG 399465
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || ||||| ||||||||||| || || || || |
Sbjct 389385 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 389444
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | || || ||| || ||||||||| | || |||||||
Sbjct 389445 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 389504
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | | |||||||| ||||||||||| |||||| ||| | ||||||||||
Sbjct 389505 CAACGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 389564
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||||||| | || |||| || || |||| || ||
Sbjct 389565 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 389611
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| ||||| | ||||| ||||| |||||||||||||| ||| ||| | |
Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| ||| | | | | ||| |||||| ||||||||||| | || ||| |||
Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139
||| | | || || || || |||||| |||||||| || | || | | || ||||
Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCT--CTGACTACA 402151
Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
| || ||||| ||||| || ||||| |||| ||||| |||| || ||
Sbjct 402152 ACATACAGAAAGAATCCACACTTCATTTGGTATTACGCCTACGTGGCGG 402200
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| |||||||| || | ||||| ||||| || ||||||||||| ||| || ||
Sbjct 388926 AACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAGCCA 388985
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | ||| |||||| ||||| |||||| | || |||
Sbjct 388986 TCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCAGAC 389045
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|||||| | | || ||||| || || ||| |||| ||| || | |||| |||
Sbjct 389046 CAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGACTAC 389105
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| ||||| |||||||| ||||| ||| |||| || || |||| || ||
Sbjct 389106 AACATTCAAAAGGAATCAACTCTCCACTTGGTCTTGCGTCTACGTGGTGG 389155
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || ||||| |||||||||||||| || ||||| |
Sbjct 389841 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAGGTTGAACCATCT 389900
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || ||||| ||||| || |||||||| | || ||||||
Sbjct 389901 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCACCAGATCAG 389960
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| | | || || || ||||| || || |||||| ||| || |||| |||||
Sbjct 389961 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACTTTGTCCGACTACAAC 390020
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| ||||| ||||||||||| ||| |||| || || |||| || ||
Sbjct 390021 ATCCAGAAAGAATCTACTCTCCACTTGGTCTTGCGTCTACGTGGTGG 390067
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || ||||| ||||||||||| || || || || |
Sbjct 390525 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 390584
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | || || ||| || ||||||||| | || |||||||
Sbjct 390585 GACACTATTGAAAATGTGAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 390644
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| | | |||||||| ||||||||||| |||||| ||| | ||||||||||
Sbjct 390645 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 390704
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||||||| | || |||| || || |||| || ||
Sbjct 390705 ATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTCTACGTGGTGG 390751
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || || | || || ||||| |||||||| || ||| || ||||| |
Sbjct 399922 ATGCAGATTTTTGTAAAGACTTTGACAGGCAAAACTATCACCTTAGAGGTCGAACCATCT 399981
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| | | | | ||||| |||||| || ||||| || | || |||||||
Sbjct 399982 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400041
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | | || ||||| || |||||| |||||||| ||| | ||||||||||
Sbjct 400042 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400101
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||||||||| || ||||| |||| |||||
Sbjct 400102 ATTCAGAAGGAATCCACACTTCATTTGGTATTACG 400136
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| ||||| | ||||| ||||| |||||||| ||||| ||| ||| | |
Sbjct 400150 ATGCAGATATTTGTTAAAACCTTGACTGGCAAAACTATTACATTGGAAGTCGAAGCATCT 400209
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| ||| | | | | ||| || ||| |||||||| || | || ||| |||
Sbjct 400210 GACACGATTGAGAACGTCAAGGCCAAGATTCAAGATAAAGAGGGCATTCCTCCAGACCAA 400269
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | | || || || || |||||| |||||||| || | | |||||||||
Sbjct 400270 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTCTCTGATTACAAT 400329
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| |||||||||||| | || |||| ||||| |||| || ||
Sbjct 400330 ATTCAAAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGG 400376
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || || || |||||||| || ||| || ||||| |
Sbjct 400378 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 400437
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| | | | | ||||| |||||| || ||||| || | || |||||||
Sbjct 400438 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400497
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | | || ||||| || |||||| |||||||| ||| | ||||||||||
Sbjct 400498 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 400557
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||||||||| || ||||| |||| |||||
Sbjct 400558 ATTCAGAAGGAATCCACACTTCATTTGGTATTACG 400592
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || || || |||||||| || ||| || ||||| |
Sbjct 400834 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 400893
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| | | | | ||||| |||||| || ||||| || | || |||||||
Sbjct 400894 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 400953
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | | || ||||| || |||||| |||||||| ||| | ||||||| |||
Sbjct 400954 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTCTCCGATTATAAT 401013
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| |||||||||||| | || |||| ||||| |||| || ||
Sbjct 401014 ATTCAAAAGGAATCTACTTTGCATTTGGTATTACGTCTACGTGGCGG 401060
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||| | || || || || |||||||| || ||| || ||||| |
Sbjct 401290 ATGCAGATTTTCGTTAAGACTTTAACAGGCAAAACGATCACCTTAGAGGTCGAACCATCT 401349
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| | | | | ||||| |||||| || ||||| || | || |||||||
Sbjct 401350 GATAGCATTGAGAACGTTAAGGCTAAAATTCAAGACAAAGAGGGCATTCCTCCAGATCAA 401409
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | | || ||||| || |||||| |||||||| ||| | ||||||||||
Sbjct 401410 CAACGTTTGATATTTGCCGGTAAACAATTGGAAGATGGACGTACTCTTTCCGATTACAAC 401469
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|||||||||||||| || ||||| |||| |||||
Sbjct 401470 ATTCAGAAGGAATCCACACTTCATTTGGTATTACG 401504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428204750086010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |