Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19926 224 7e-54
>SEQ19926
Length=251428
Score = 224 bits (248), Expect = 7e-54
Identities = 434/634 (68%), Gaps = 5/634 (1%)
Strand=Plus/Minus
Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066
|||| |||| || ||| | || |||| ||||| | | || || | |||||| ||
Sbjct 64347 TTGGAAAAGCTCTTGGAATACGTTTAAGTTGCTCCTTTAAAGGTTCGACATGATTCTTAT 64288
Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126
| | || | ||| || | |||||| | ||| ||||| ||| | || ||||| |
Sbjct 64287 ATACATGCGTATCACCCATAGTGTGTACAAAACAACCAGGCTTTAATCCCGTAACATGCG 64228
Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATAT 97186
| |||||| || | || || ||| ||||| ||||| || || || || |||||||
Sbjct 64227 CAATCATATGCGTAAGTAAAGCATAAGAGGCAATATTAAATGGAACACCAAGACCCATAT 64168
Query 97187 CAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA-CTC 97245
|||| | ||||||| ||||| || | || | | | || |||||||| ||
Sbjct 64167 CAGCACTGCGCTGATATAGTTGACAAGATAACTCATCGTTAGCTACGAAAAACTGAGCTA 64108
Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305
|| | ||| || || || | |||||||| || | ||| | |||||| ||| ||||
Sbjct 64107 AACA-ATGGCATGGTGGTAGTGCCATTTTAGGTATATCACATGGATTCCATGCAGACATT 64049
Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365
| || |||||||| |||| ||||| |||| |||| ||| | | || | |||||||
Sbjct 64048 ATAATCCTTCTATCATTTGGATTTGTACGTATAGTATCAATAACGTTTTTAAGTTGATCA 63989
Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425
| ||||| | |||| || | | || | | ||||||||| || ||||| | ||||
Sbjct 63988 ATACCTTCATTGCTGTAATCATGATGACGATCCTTATATTCTGCACCGAAATGACGCCAT 63929
Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485
|| || |||||||| ||||| | || |||||||| | || |||||||| ||||||
Sbjct 63928 TGAAAGCCATAAACTGGTCCTAAATCGCCTTCTTCACGTTCGTGTAAACCAAGTTTATCT 63869
Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACA-CCAGATGCTGCAAGCTCTTT 97544
||| | | | || | ||| |||||||||| || | | | || ||||| ||
Sbjct 63868 AAAAATGCACGGGAACTATTCCCATCCCAAATATGTATATTCTTATCTTGCAATAGCTGC 63809
Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604
|| || || |||||| | |||||||||| ||| || || |||||| | | |||||| ||
Sbjct 63808 GC-ATCTGTTGATCCTTTTATAAACCACAGCAACTCCTCTACAACAGCACGCCAAAAAAC 63750
Query 97605 TCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCT 97638
| |||||||| || || || ||| ||||||||
Sbjct 63749 ACGTTTAGTTGTCAATAGCGG-AAACCCTTTTCT 63717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346677739096940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |