Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value SEQ19926 224 7e-54 >SEQ19926 Length=251428 Score = 224 bits (248), Expect = 7e-54 Identities = 434/634 (68%), Gaps = 5/634 (1%) Strand=Plus/Minus Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066 |||| |||| || ||| | || |||| ||||| | | || || | |||||| || Sbjct 64347 TTGGAAAAGCTCTTGGAATACGTTTAAGTTGCTCCTTTAAAGGTTCGACATGATTCTTAT 64288 Query 97067 AAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGG 97126 | | || | ||| || | |||||| | ||| ||||| ||| | || ||||| | Sbjct 64287 ATACATGCGTATCACCCATAGTGTGTACAAAACAACCAGGCTTTAATCCCGTAACATGCG 64228 Query 97127 CGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATAT 97186 | |||||| || | || || ||| ||||| ||||| || || || || ||||||| Sbjct 64227 CAATCATATGCGTAAGTAAAGCATAAGAGGCAATATTAAATGGAACACCAAGACCCATAT 64168 Query 97187 CAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGA-CTC 97245 |||| | ||||||| ||||| || | || | | | || |||||||| || Sbjct 64167 CAGCACTGCGCTGATATAGTTGACAAGATAACTCATCGTTAGCTACGAAAAACTGAGCTA 64108 Query 97246 AATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATC 97305 || | ||| || || || | |||||||| || | ||| | |||||| ||| |||| Sbjct 64107 AACA-ATGGCATGGTGGTAGTGCCATTTTAGGTATATCACATGGATTCCATGCAGACATT 64049 Query 97306 AACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCA 97365 | || |||||||| |||| ||||| |||| |||| ||| | | || | ||||||| Sbjct 64048 ATAATCCTTCTATCATTTGGATTTGTACGTATAGTATCAATAACGTTTTTAAGTTGATCA 63989 Query 97366 ACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 | ||||| | |||| || | | || | | ||||||||| || ||||| | |||| Sbjct 63988 ATACCTTCATTGCTGTAATCATGATGACGATCCTTATATTCTGCACCGAAATGACGCCAT 63929 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 || || |||||||| ||||| | || |||||||| | || |||||||| |||||| Sbjct 63928 TGAAAGCCATAAACTGGTCCTAAATCGCCTTCTTCACGTTCGTGTAAACCAAGTTTATCT 63869 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACA-CCAGATGCTGCAAGCTCTTT 97544 ||| | | | || | ||| |||||||||| || | | | || ||||| || Sbjct 63868 AAAAATGCACGGGAACTATTCCCATCCCAAATATGTATATTCTTATCTTGCAATAGCTGC 63809 Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604 || || || |||||| | |||||||||| ||| || || |||||| | | |||||| || Sbjct 63808 GC-ATCTGTTGATCCTTTTATAAACCACAGCAACTCCTCTACAACAGCACGCCAAAAAAC 63750 Query 97605 TCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCT 97638 | |||||||| || || || ||| |||||||| Sbjct 63749 ACGTTTAGTTGTCAATAGCGG-AAACCCTTTTCT 63717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346677739096940