Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value SEQ17304 80.6 7e-11 >SEQ17304 Length=5410 Score = 80.6 bits (88), Expect = 7e-11 Identities = 158/233 (68%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 28326 TGGGTTTAGTGGTTGTAAAAACACCTGACCGCTATCCCTGATCAGTTTCTTGAAGGTAAA 28385 |||||| | ||||| ||| | || | || ||||| | | ||| || ||||| || Sbjct 1702 TGGGTTCAATGGTTCTAATATTACTTTGCCAGCGTCCCTAGTTAATTTTTTAAAGGTGAA 1761 Query 28386 CTCATCACCCCCAAG--TCTGGCTATGCAGAAATCACCTGGCTCAACAGCCTGCTCAGGG 28443 ||||| || || | | |||||||| || || || | ||||||| | | |||| Sbjct 1762 CTCATTTCCATTAATCTTTTTGCTATGCAAAAGTCTCCCGTATCAACAGGTTCATTAGGG 1821 Query 28444 TCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTGGATCCTGTTGGCGCGGTCATG 28503 |||| | ||||| || || || || || || ||||| | |||| ||| || ||||| Sbjct 1822 TCAATTAATATTAAAATGCCTTCTGGGAAGCTTGGTTTTGTTCCTTGTGGAGCTGTCATA 1881 Query 28504 GAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTTTTGGTTGT 28556 || | |||||| || || | ||| || | ||||||||||| || | ||| Sbjct 1882 GAGTGACCTTCTACTTCTAACCAAAAGGATCTGTCACTGGCTTTCTTTGCTGT 1934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126982876511176