Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value SEQ20258 86.0 1e-11 seq3264 86.0 1e-11 >SEQ20258 Length=134083 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 189482 GAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACT 189541 ||||| |||||||| ||||| ||||||||||||||||||| || |||||||||||||| Sbjct 132320 GAAGGCAAAATGCACGGTTTTCTACGAATGTATTGGGCTAAAAAAATACTTGAATGGACA 132379 Query 189542 AGAACACCTGAA 189553 ||| |||||| Sbjct 132380 GAAACTCCTGAA 132391 >seq3264 Length=23417 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 189482 GAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACT 189541 ||||| |||||||| ||||| ||||||||||||||||||| || |||||||||||||| Sbjct 18686 GAAGGCAAAATGCACGGTTTTCTACGAATGTATTGGGCTAAAAAAATACTTGAATGGACA 18627 Query 189542 AGAACACCTGAA 189553 ||| |||||| Sbjct 18626 GAAACTCCTGAA 18615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922906662325680