Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 118 2e-21
seq5553 98.7 1e-15
seq2607 98.7 1e-15
>SEQ18352
Length=541547
Score = 118 bits (130), Expect = 2e-21
Identities = 102/124 (82%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 146065 TAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTAT 146123
|||||||||||| ||||||||||| ||| || ||||||||||| || ||||| | | ||
Sbjct 401046 TAATACCAAATGCAAAGTAGATTCCTTTTGA-ATATTATAATCGGAGAGAGTACGTCCAT 400988
Query 146124 CATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTAT 146183
| || |||||||| || ||||| ||||| | ||| ||||| |||||||| || ||||| |
Sbjct 400987 CTTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGT 400928
Query 146184 CTTG 146187
||||
Sbjct 400927 CTTG 400924
Score = 113 bits (124), Expect = 7e-20
Identities = 101/124 (81%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 146065 TAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTAT 146123
|||||||||||| ||||||||||| ||| || ||||| ||||| || || || | | ||
Sbjct 400362 TAATACCAAATGCAAAGTAGATTCCTTTTGA-ATATTGTAATCAGAGAGGGTACGTCCAT 400304
Query 146124 CATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTAT 146183
| || |||||||| ||||| |||||||| | ||| || || |||||||| || |||||||
Sbjct 400303 CTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTAT 400244
Query 146184 CTTG 146187
||||
Sbjct 400243 CTTG 400240
Score = 109 bits (120), Expect = 8e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
|||||||||||| ||||||||||| || ||||| ||||| || ||||| | | |||
Sbjct 400818 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATC 400759
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| ||||| || ||||| |||||||| | ||| || || |||||||| || ||||||||
Sbjct 400758 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 400699
Query 146185 TTG 146187
|||
Sbjct 400698 TTG 400696
Score = 109 bits (120), Expect = 8e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
|||||||||||| ||||||||||| || ||||| ||||| || ||||| | | |||
Sbjct 401730 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATC 401671
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| ||||| || ||||| |||||||| | ||| || || |||||||| || ||||||||
Sbjct 401670 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 401611
Query 146185 TTG 146187
|||
Sbjct 401610 TTG 401608
Score = 107 bits (118), Expect = 3e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||||||||||||||| || || || ||||| || ||||| | | |||
Sbjct 389596 AATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCT 389537
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| | |||||| |||||||| || || | ||| ||||| |||||||| |||||||| |||
Sbjct 389536 TCAAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCT 389477
Query 146186 TG 146187
||
Sbjct 389476 TG 389475
Score = 105 bits (116), Expect = 1e-17
Identities = 97/123 (79%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
|||||||||||| ||||||||||| || ||||| ||||| || || || | | |||
Sbjct 401274 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATC 401215
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| |||||||| |||||||| ||||| | ||| || || |||||||| || ||||| ||
Sbjct 401214 TTCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401155
Query 146185 TTG 146187
|||
Sbjct 401154 TTG 401152
Score = 104 bits (114), Expect = 3e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||||||||||||||| || || || ||||| || ||||| | | |||
Sbjct 390736 AATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCT 390677
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| | |||||| |||||||| || || | || ||||| |||||||| |||||||| |||
Sbjct 390676 TCAAGTTGTTTGCCAGCAAAGATTAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 390617
Query 146186 TG 146187
||
Sbjct 390616 TG 390615
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | |||||||||||| | || ||||| || || || ||||| |||
Sbjct 400148 CCACCCCGAAGACGTAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAA 400089
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| || |||||||| || ||||| ||||| | ||| ||||| ||||||
Sbjct 400088 AGAGTACGTCCATCTTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGA 400029
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || ||||| |||||
Sbjct 400028 ATGCCCTCTTTGTCTTG 400012
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | |||||||||||| | || ||||| || || || ||||| |||
Sbjct 400604 CCACCCCGAAGACGTAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAA 400545
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| || |||||||| || ||||| ||||| | ||| ||||| ||||||
Sbjct 400544 AGAGTACGTCCATCTTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGA 400485
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || ||||| |||||
Sbjct 400484 ATGCCCTCTTTGTCTTG 400468
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | |||||||||||| | || ||||| || || || ||||| |||
Sbjct 401516 CCACCCCGAAGACGTAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAA 401457
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| || |||||||| || ||||| ||||| | ||| ||||| ||||||
Sbjct 401456 AGAGTACGTCCATCTTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGA 401397
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || ||||| |||||
Sbjct 401396 ATGCCCTCTTTGTCTTG 401380
Score = 102 bits (112), Expect = 1e-16
Identities = 154/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | |||||||||||| | || ||||| || || || ||||| |||
Sbjct 401972 CCACCCCGAAGACGTAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAA 401913
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| || |||||||| || ||||| ||||| | ||| || || ||||||
Sbjct 401912 AGAGTACGTCCATCTTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGA 401853
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| || ||||| ||||| | |||| || ||| ||
Sbjct 401852 ATGCCCTCTTTGTCTTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACC 401793
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| ||||| |||||||| || |||| ||| || |||||
Sbjct 401792 TCTAAGGTGATCGTTTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401746
Score = 100 bits (110), Expect = 4e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
|||||||||||| | || |||||||| ||| || || || || || || | | |||
Sbjct 402186 TAATACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATC 402127
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| |||||||| ||||| |||||||| | ||| || || |||||||| |||||||||||
Sbjct 402126 TTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATC 402067
Query 146185 TTG 146187
|||
Sbjct 402066 TTG 402064
Score = 95.1 bits (104), Expect = 2e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125
||||||||||||||||||||||| || || || || || || | ||| | | |||
Sbjct 390964 AATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTACGACCATCT 390905
Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185
|| | |||||| |||||||| || || | || ||||| || ||||| ||||||||||||
Sbjct 390904 TCAAGTTGTTTGCCAGCAAAGATTAAACGCTGTTGATCTGGGGGAATGCCTTCTTTATCT 390845
Query 146186 TG 146187
||
Sbjct 390844 TG 390843
Score = 93.3 bits (102), Expect = 6e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128
|||||||| | ||||| || || ||||||||||| || | ||| | | ||| ||
Sbjct 402410 ACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGATAAAGTGCGACCATCCTCC 402351
Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||||| ||||||||||| | | ||| ||||| |||||||| || |||||||||||
Sbjct 402350 AATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGGAATGCCCTCTTTATCTTG 402292
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | || | ||| |||||||| ||||||||||| || || || || || ||
Sbjct 399920 CCACCACGTAGACGTAACACCAAATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAG 399861
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| || | |||||| |||||||| || | | ||| ||||| || ||
Sbjct 399860 AGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGT 399801
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 399800 ATACCTTCTTTGTCTTG 399784
>seq5553
Length=18996
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
|| ||||| || | || ||||| ||| || ||||||||||| || | || | | |||
Sbjct 18570 AACACCAAGTGAAGTGTTGATTCCTTTTGA-ATATTATAATCGGACAATGTGCGACCATC 18512
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| |||||||| |||||||||||||| | ||||||||| ||||||||||| ||||| ||
Sbjct 18511 TTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTC 18452
Query 146185 TTG 146187
||
Sbjct 18451 CTG 18449
>seq2607
Length=223464
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
|| ||||| || | || ||||| ||| || ||||||||||| || | || | | |||
Sbjct 124820 AACACCAAGTGAAGTGTTGATTCCTTTTGA-ATATTATAATCGGACAATGTGCGACCATC 124878
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| |||||||| |||||||||||||| | ||||||||| ||||||||||| ||||| ||
Sbjct 124879 TTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTC 124938
Query 146185 TTG 146187
||
Sbjct 124939 CTG 124941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743292728240640
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