Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 104 2e-17
>SEQ18352
Length=541547
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||||||||||||||| || | ||| | || ||||||||||| || |||||
Sbjct 390488 TTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCCAACTGCTTACCAGCGAA 390429
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||| | |||||||| || ||| | || ||| ||||| || || ||| | ||
Sbjct 390428 AATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTGACATT 390369
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | ||| | | ||| || |||| || ||||||||||| || | ||| || ||
Sbjct 390368 TTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGAC 390309
Query 34378 AAAGATCTGCAT 34389
||||||||||||
Sbjct 390308 AAAGATCTGCAT 390297
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | || |||| ||| | |||| ||||||||| |||||||||||||||
Sbjct 390067 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCGGAC 390008
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| | || || | ||||||||| |||||||| | |||||||| || ||
Sbjct 390007 AAAGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGTGGA 389948
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || || ||||| || || ||| | || | || | ||| | | ||| ||
Sbjct 389947 ATGCCTTCTTTGTCTTGGATTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTCAACC 389888
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||||||||| || | || || || |||||||||||
Sbjct 389887 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389841
Score = 87.8 bits (96), Expect = 1e-12
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256
||| ||||| ||||| ||||| |||| | || || | || ||||||||||| || ||||
Sbjct 391400 TTCCTTCTGAATGTTATAGTCAGACAAGGTG-CGACCATCTTCCAACTGCTTACCAGCGA 391342
Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315
|||| | |||||||| || ||| | || ||| ||||| ||| || ||||| | |
Sbjct 391341 AAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGGATC-TTAGCTTTAACA 391283
Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375
| | || | || | | ||| || |||| || ||||||||||| || | || ||
Sbjct 391282 TTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTT 391223
Query 34376 ACAAAGATCTGCAT 34389
|| |||||||||||
Sbjct 391222 ACGAAGATCTGCAT 391209
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTC 34239
||||| || |||||| ||| ||||| |||||||||||||| || ||| | || ||
Sbjct 399903 CACCAAATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTC 399844
Query 34240 CAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGC 34299
| || ||||| || || || || || || || || || | | || |||||
Sbjct 399843 AAGTTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTG 399784
Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359
|| || |||| || |||| | || | ||||| || |||| |||||||||||
Sbjct 399783 AATTTTAGATTTTACATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTT 399724
Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || | |||||| ||||| ||||||||
Sbjct 399723 TCCAGTCAAAGTTTTGACAAATATCTGCAT 399694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322973004883520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |