Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 104 2e-17 >SEQ18352 Length=541547 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||||||||||||||| || | ||| | || ||||||||||| || ||||| Sbjct 390488 TTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCTTCCAACTGCTTACCAGCGAA 390429 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| | |||||||| || ||| | || ||| ||||| || || ||| | || Sbjct 390428 AATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGAATTTTAGCCTTGACATT 390369 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||| | | ||| || |||| || ||||||||||| || | ||| || || Sbjct 390368 TTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGAC 390309 Query 34378 AAAGATCTGCAT 34389 |||||||||||| Sbjct 390308 AAAGATCTGCAT 390297 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || |||| ||| | |||| ||||||||| ||||||||||||||| Sbjct 390067 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCGGAC 390008 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||||||||| |||||||| | |||||||| || || Sbjct 390007 AAAGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGTGGA 389948 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || ||||| || || ||| | || | || | ||| | | ||| || Sbjct 389947 ATGCCTTCTTTGTCTTGGATTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTCAACC 389888 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||||||||||| || | || || || ||||||||||| Sbjct 389887 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389841 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256 ||| ||||| ||||| ||||| |||| | || || | || ||||||||||| || |||| Sbjct 391400 TTCCTTCTGAATGTTATAGTCAGACAAGGTG-CGACCATCTTCCAACTGCTTACCAGCGA 391342 Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGA 34315 |||| | |||||||| || ||| | || ||| ||||| ||| || ||||| | | Sbjct 391341 AAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCTTGGATC-TTAGCTTTAACA 391283 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | || | || | | ||| || |||| || ||||||||||| || | || || Sbjct 391282 TTTTCAATGGTGTCAGATGGTTCAACCTCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTT 391223 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 391222 ACGAAGATCTGCAT 391209 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34180 CACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTC 34239 ||||| || |||||| ||| ||||| |||||||||||||| || ||| | || || Sbjct 399903 CACCAAATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCTTC 399844 Query 34240 CAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGC 34299 | || ||||| || || || || || || || || || | | || ||||| Sbjct 399843 AAGTTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCTTG 399784 Query 34300 TATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359 || || |||| || |||| | || | ||||| || |||| ||||||||||| Sbjct 399783 AATTTTAGATTTTACATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTTTT 399724 Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||| ||||| |||||||| Sbjct 399723 TCCAGTCAAAGTTTTGACAAATATCTGCAT 399694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322973004883520