Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19926 223 3e-53
>SEQ19926
Length=251428
Score = 223 bits (246), Expect = 3e-53
Identities = 539/806 (67%), Gaps = 14/806 (2%)
Strand=Plus/Plus
Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037
|| || || || || || || || ||| | ||||| | ||| || | ||| |||||
Sbjct 63660 GACCGTACTGGTACAGGTACCTTTTCTATTTTTGGCACACAAATGCGTTTCAACATGAGA 63719
Query 20038 AATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTA 20097
|| | ||||| |||| || || ||||| || |||||| | ||||| || |||||
Sbjct 63720 AAAGGGTTTCCGCTATTGACAACTAAACGTGTTTTTTGGCGTGCTGTTGTAGAGGAGTTG 63779
Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTA-AGAT 20156
| |||||||| |||||||||||| || | | | ||| | | ||| | || | ||
Sbjct 63780 CTGTGGTTTATAAAAGGATCAACAGATGCG-CAGCTATTGCAAGATAAGAATATACATAT 63838
Query 20157 TTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGA 20216
|||| | || | || ||||||| | | ||| || || | ||| ||||
Sbjct 63839 TTGGGATGGGAATAGTTCCCGTGCATTTTTAGATAAACTTGGTTTACACGAACGTGAAGA 63898
Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276
|| ||||| || || || ||||| ||||||||| | ||||| || || |||||| ||
Sbjct 63899 AGGCGATTTAGGACCAGTTTATGGCTTTCAATGGCGTCATTTCGGTGCAGAATATAAGGA 63958
Query 20277 -CATGAACACAAATTATTTTGGACAAGGA--GTA--GATCAATTACAAAATGTTATTAAT 20331
| | | || | ||| | ||| || ||| |||||| | |||| |||||| ||
Sbjct 63959 TCGTCATCA----TGATTACAG-CAATGAAGGTATTGATCAACTTAAAAACGTTATTGAT 64013
Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391
|| || || ||||| || ||||| ||||| | | || ||||| | |||
Sbjct 64014 ACTATACGTACAAATCCAAATGATAGAAGGATTATAATGTCTGCATGGAATCCATGTGAT 64073
Query 20392 GTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAA 20450
| ||| |||||| | || ||||| ||| || | || || |||| ||| ||||| |
Sbjct 64074 ATACCTAAAATGGCACTACCACCATGCCAT-TGTTTAGCTCAGTTTTTCGTAGCTAACGA 64132
Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510
||| || || |||||| | ||||| || ||||||||||| || |||||||| || ||
Sbjct 64133 TGAGTTATCTTGTCAACTATATCAGCGCAGTGCTGATATGGGTCTTGGTGTTCCATTTAA 64192
Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570
|||||| |||||| | |||||| |||||||||| |||||||| | ||||| | ||
Sbjct 64193 TATTGCCTCTTATGCTTTACTTACGCATATGATTGCGCATGTTACGGGATTAAAGCCTGG 64252
Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630
| || || ||||| || || || ||||| | || |||||| | |||||||||||
Sbjct 64253 TTGTTTTGTACACACTATGGGTGATACGCATGTATATAAGAATCATGTCGAACCTTTAAA 64312
Query 20631 ATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAA 20690
|| | | ||| |||| | || |||| | | || | || || ||
Sbjct 64313 GGAGCAACTTAAACGTATTCCAAGAGCTTTTCCAAAATTGCTTATAAAACGTGAAGTAAA 64372
Query 20691 AGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTC 20750
| |||| | ||||||| ||||||||||| || || |||||||| || |
Sbjct 64373 AAGTATTGAAGATTTTACCTTTGATGATTTTGAAATAATTGGCTATAATCCATATCCTAA 64432
Query 20751 AATTCCAATGGAAATGTCTGTTTAAT 20776
||| | |||||| ||| |||||||||
Sbjct 64433 AATCCAAATGGAGATGGCTGTTTAAT 64458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399061682787190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |