Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value SEQ19926 223 3e-53 >SEQ19926 Length=251428 Score = 223 bits (246), Expect = 3e-53 Identities = 539/806 (67%), Gaps = 14/806 (2%) Strand=Plus/Plus Query 19978 GATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGA 20037 || || || || || || || || ||| | ||||| | ||| || | ||| ||||| Sbjct 63660 GACCGTACTGGTACAGGTACCTTTTCTATTTTTGGCACACAAATGCGTTTCAACATGAGA 63719 Query 20038 AATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTA 20097 || | ||||| |||| || || ||||| || |||||| | ||||| || ||||| Sbjct 63720 AAAGGGTTTCCGCTATTGACAACTAAACGTGTTTTTTGGCGTGCTGTTGTAGAGGAGTTG 63779 Query 20098 TTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTA-AGAT 20156 | |||||||| |||||||||||| || | | | ||| | | ||| | || | || Sbjct 63780 CTGTGGTTTATAAAAGGATCAACAGATGCG-CAGCTATTGCAAGATAAGAATATACATAT 63838 Query 20157 TTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGA 20216 |||| | || | || ||||||| | | ||| || || | ||| |||| Sbjct 63839 TTGGGATGGGAATAGTTCCCGTGCATTTTTAGATAAACTTGGTTTACACGAACGTGAAGA 63898 Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 || ||||| || || || ||||| ||||||||| | ||||| || || |||||| || Sbjct 63899 AGGCGATTTAGGACCAGTTTATGGCTTTCAATGGCGTCATTTCGGTGCAGAATATAAGGA 63958 Query 20277 -CATGAACACAAATTATTTTGGACAAGGA--GTA--GATCAATTACAAAATGTTATTAAT 20331 | | | || | ||| | ||| || ||| |||||| | |||| |||||| || Sbjct 63959 TCGTCATCA----TGATTACAG-CAATGAAGGTATTGATCAACTTAAAAACGTTATTGAT 64013 Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391 || || || ||||| || ||||| ||||| | | || ||||| | ||| Sbjct 64014 ACTATACGTACAAATCCAAATGATAGAAGGATTATAATGTCTGCATGGAATCCATGTGAT 64073 Query 20392 GTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAA 20450 | ||| |||||| | || ||||| ||| || | || || |||| ||| ||||| | Sbjct 64074 ATACCTAAAATGGCACTACCACCATGCCAT-TGTTTAGCTCAGTTTTTCGTAGCTAACGA 64132 Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510 ||| || || |||||| | ||||| || ||||||||||| || |||||||| || || Sbjct 64133 TGAGTTATCTTGTCAACTATATCAGCGCAGTGCTGATATGGGTCTTGGTGTTCCATTTAA 64192 Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGG 20570 |||||| |||||| | |||||| |||||||||| |||||||| | ||||| | || Sbjct 64193 TATTGCCTCTTATGCTTTACTTACGCATATGATTGCGCATGTTACGGGATTAAAGCCTGG 64252 Query 20571 TGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAA 20630 | || || ||||| || || || ||||| | || |||||| | ||||||||||| Sbjct 64253 TTGTTTTGTACACACTATGGGTGATACGCATGTATATAAGAATCATGTCGAACCTTTAAA 64312 Query 20631 ATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTAA 20690 || | | ||| |||| | || |||| | | || | || || || Sbjct 64313 GGAGCAACTTAAACGTATTCCAAGAGCTTTTCCAAAATTGCTTATAAAACGTGAAGTAAA 64372 Query 20691 AGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAATTC 20750 | |||| | ||||||| ||||||||||| || || |||||||| || | Sbjct 64373 AAGTATTGAAGATTTTACCTTTGATGATTTTGAAATAATTGGCTATAATCCATATCCTAA 64432 Query 20751 AATTCCAATGGAAATGTCTGTTTAAT 20776 ||| | |||||| ||| ||||||||| Sbjct 64433 AATCCAAATGGAGATGGCTGTTTAAT 64458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399061682787190