Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 114 1e-20
SEQ18478 84.2 2e-11
seq9966 84.2 2e-11
>SEQ18352
Length=541547
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||||||||| || || ||| ||||||||||||||||| ||| || || | ||
Sbjct 400134 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 400075
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| |||||| ||||| |||||||| || ||||| || ||||| | ||||| |||||
Sbjct 400074 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400015
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|||||| |||||| | | | ||| || || ||||| | ||| || ||
Sbjct 400014 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATAGT 399955
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| |||| |||||| ||||| || |||||
Sbjct 399954 TTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||||||||| || || ||| ||||||||||||||||| ||| || || | ||
Sbjct 400590 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 400531
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| |||||| ||||| |||||||| || ||||| || ||||| | ||||| |||||
Sbjct 400530 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400471
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|||||| |||||| | | | ||| || || ||||| | ||| |||||
Sbjct 400470 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 400411
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || | |||||| || || || |||||
Sbjct 400410 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 400378
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||||||||| || || ||| ||||||||||||||||| ||| || || | ||
Sbjct 401502 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 401443
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| |||||| ||||| |||||||| || ||||| || ||||| | ||||| |||||
Sbjct 401442 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 401383
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|||||| |||||| | | | ||| || || ||||| | ||| |||||
Sbjct 401382 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 401323
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || | |||||| || || || |||||
Sbjct 401322 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401290
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||||||||| || || ||| ||||||||||||||||| ||| || || | ||
Sbjct 401958 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 401899
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| |||||| ||||| |||||||| || |||||||| ||||| | ||||| |||||
Sbjct 401898 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401839
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|||||| ||| || | | | || || || ||||| | ||| |||||
Sbjct 401838 TTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACCTCTAAGGTGATCGT 401779
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || | |||||| || || || |||||
Sbjct 401778 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401746
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| || || ||||| ||||||||||||||| || || | ||
Sbjct 389140 AAGACCAAGTGGAGAGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGCCCATCC 389081
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|||| ||| || || || || || || || |||||||| || || | ||| ||||| |||
Sbjct 389080 TCCAATTGCTTACCAGCAAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCC 389021
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
|||||| ||| || | | | |||| ||| || |||| ||||| ||
Sbjct 389020 TGAATTTTAGCCTTGACATTTTCAATGGTGTCGGATGGCTCGACTTCCAAAGTAATGGTT 388961
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|| || |||| ||| |||||||||||||||||||||
Sbjct 388960 TTACCAGTCAAAGTTTTCACAAAGATTTGCATGTTG 388925
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||||||||| |||| || ||||||||||| ||||| ||| || |||| | ||
Sbjct 401274 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATC 401215
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| |||||| || || |||||||| || |||||||| ||||| | ||||| |||||
Sbjct 401214 TTCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401155
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|||||| ||| || | | | || || || || || | ||||| ||
Sbjct 401154 TTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGT 401095
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||| ||||| || || ||||| || |||||
Sbjct 401094 CTTGCCGGTCAGGGTTTTAACAAATATCTGCAT 401062
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||||||||| || || ||| || ||||| ||||||||||| || |||| | ||
Sbjct 402186 TAATACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATC 402127
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|||| |||||| || ||||| ||||| || |||||||| ||||| | || || || ||
Sbjct 402126 TTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATC 402067
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|||||| ||| || | | | |||| | || || |||| ||||| ||
Sbjct 402066 TTGAATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGT 402007
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| |||| || || ||||| || |||||
Sbjct 402006 TTTGCCAGTCAAGGTTTTTACAAATATCTGCAT 401974
>SEQ18478
Length=82247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTC 45183
|| ||||| || || || |||||| |||||||||||||| | | || | ||| | ||
Sbjct 41427 AACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGATAAGGT-GCGTCCATC 41485
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| ||||| || || ||||| ||||| || ||||| || || || | |||||||| ||
Sbjct 41486 TTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATC 41545
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
||||| ||| || | | |||| | ||| || |||| || || ||
Sbjct 41546 TTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGT 41605
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341
|||||| |||| ||| || || || || ||||| ||||
Sbjct 41606 CTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTTGC 41643
>seq9966
Length=18433
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTC 45183
|| ||||| || || || |||||| |||||||||||||| | | || | ||| | ||
Sbjct 14138 AACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGATAAGGT-GCGTCCATC 14196
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| ||||| || || ||||| ||||| || ||||| || || || | |||||||| ||
Sbjct 14197 TTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATGCCCTCCTTATC 14256
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
||||| ||| || | | |||| | ||| || |||| || || ||
Sbjct 14257 TTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACTTCCAAAGTGATAGT 14316
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341
|||||| |||| ||| || || || || ||||| ||||
Sbjct 14317 CTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTTGC 14354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394954141797982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |