Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value SEQ23413 141 9e-29 SEQ14824 141 9e-29 SEQ11801 122 8e-23 >SEQ23413 Length=15718 Score = 141 bits (156), Expect = 9e-29 Identities = 294/435 (68%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 14021 AGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTC 14080 || || | ||| || | ||| || | || || |||||||||||||| | | |||||| Sbjct 607 AGCTCAACTAGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTC 666 Query 14081 ATACCTATTAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 ||||| | || || |||| || || | ||| || |||||||| || ||||| Sbjct 667 ATACCAAGGAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGC 725 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199 || ||||||| ||||| || ||||| ||| | | | ||||| ||| || Sbjct 726 ATCTGTTATAATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACAT 785 Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 | || ||||| |||||||| | |||||||| | | ||| | ||| || |||||||| Sbjct 786 AAGGCATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGT 845 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 ||| || |||| | || |||| |||||||| || || ||||| || ||| || Sbjct 846 TAAACCAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAA 905 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||||| || ||||| |||||||| || || | ||||| ||||| ||| |||| Sbjct 906 AAATATACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGA 965 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || ||||| | |||||||||| || || | ||| || |||||||| Sbjct 966 AGAAATCCAAGATAGTGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGC 1025 Query 14440 ATTAAATAAATGTTC 14454 |||||| ||||| || Sbjct 1026 ATTAAACAAATGCTC 1040 Score = 118 bits (130), Expect = 1e-21 Identities = 182/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 14477 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14536 || || ||||| | | |||||||||||| || || | ||||| || ||||| ||||| Sbjct 1119 TAAGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAAT 1178 Query 14537 CCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTT 14596 || || || ||||||||||| | ||| || ||| | || | || | ||||| Sbjct 1179 CCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTC 1238 Query 14597 TCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGC 14656 || ||||| ||||||||| ||| ||||| || || || || | |||||||| || || Sbjct 1239 TCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAATAACGC 1298 Query 14657 TCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACT 14716 || | | | | ||| | |||||| | |||||||||| ||| || || || || || Sbjct 1299 TCGTTGTCATTCAATTTCTCCCAATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACA 1358 Query 14717 GTCCAAAAACTAGCAACAGC 14736 ||||||| ||| |||| Sbjct 1359 ACCCAAAAAGAAGCCTCAGC 1378 >SEQ14824 Length=19491 Score = 141 bits (156), Expect = 9e-29 Identities = 294/435 (68%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 14021 AGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTC 14080 || || | ||| || | ||| || | || || |||||||||||||| | | |||||| Sbjct 4943 AGCTCAACTAGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTC 5002 Query 14081 ATACCTATTAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 ||||| | || || |||| || || | ||| || |||||||| || ||||| Sbjct 5003 ATACCAAGGAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGC 5061 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199 || ||||||| ||||| || ||||| ||| | | | ||||| ||| || Sbjct 5062 ATCTGTTATAATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACAT 5121 Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 | || ||||| |||||||| | |||||||| | | ||| | ||| || |||||||| Sbjct 5122 AAGGCATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGT 5181 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 ||| || |||| | || |||| |||||||| || || ||||| || ||| || Sbjct 5182 TAAACCAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAA 5241 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||||| || ||||| |||||||| || || | ||||| ||||| ||| |||| Sbjct 5242 AAATATACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGA 5301 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || ||||| | |||||||||| || || | ||| || |||||||| Sbjct 5302 AGAAATCCAAGATAGTGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGC 5361 Query 14440 ATTAAATAAATGTTC 14454 |||||| ||||| || Sbjct 5362 ATTAAACAAATGCTC 5376 Score = 141 bits (156), Expect = 9e-29 Identities = 294/435 (68%), Gaps = 2/435 (0%) Strand=Plus/Plus Query 14021 AGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTC 14080 || || | ||| || | ||| || | || || |||||||||||||| | | |||||| Sbjct 11742 AGCTCAACTAGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTC 11801 Query 14081 ATACCTATTAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 ||||| | || || |||| || || | ||| || |||||||| || ||||| Sbjct 11802 ATACCAAGGAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGC 11860 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199 || ||||||| ||||| || ||||| ||| | | | ||||| ||| || Sbjct 11861 ATCTGTTATAATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACAT 11920 Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 | || ||||| |||||||| | |||||||| | | ||| | ||| || |||||||| Sbjct 11921 AAGGCATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGT 11980 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 ||| || |||| | || |||| |||||||| || || ||||| || ||| || Sbjct 11981 TAAACCAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAA 12040 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||||| || ||||| |||||||| || || | ||||| ||||| ||| |||| Sbjct 12041 AAATATACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTAGA 12100 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || ||||| | |||||||||| || || | ||| || |||||||| Sbjct 12101 AGAAATCCAAGATAGTGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATAGC 12160 Query 14440 ATTAAATAAATGTTC 14454 |||||| ||||| || Sbjct 12161 ATTAAACAAATGCTC 12175 Score = 122 bits (134), Expect = 8e-23 Identities = 183/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 14477 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14536 || || ||||| | | |||||||||||| || || | ||||| || ||||| ||||| Sbjct 5455 TAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAAT 5514 Query 14537 CCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTT 14596 || || || ||||||||||| | ||| || ||| | || | || | ||||| Sbjct 5515 CCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTC 5574 Query 14597 TCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGC 14656 || ||||| ||||||||| ||| ||||| || || || || | ||||||||||| || Sbjct 5575 TCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGC 5634 Query 14657 TCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACT 14716 || | | | | ||| | |||||| | |||||||||| ||| || || || || || Sbjct 5635 TCGTTGTCATTTAATTTCTCCCAATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACA 5694 Query 14717 GTCCAAAAACTAGCAACAGC 14736 ||||||| ||| |||| Sbjct 5695 ACCCAAAAAGAAGCCTCAGC 5714 Score = 122 bits (134), Expect = 8e-23 Identities = 183/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 14477 TATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAA 14536 || || ||||| | | |||||||||||| || || | ||||| || ||||| ||||| Sbjct 12254 TAGGTGTCAATCAAGATGCTATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAAT 12313 Query 14537 CCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTT 14596 || || || ||||||||||| | ||| || ||| | || | || | ||||| Sbjct 12314 CCGTAGAAGCATCTAGCTTCAGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTC 12373 Query 14597 TCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGC 14656 || ||||| ||||||||| ||| ||||| || || || || | ||||||||||| || Sbjct 12374 TCGTTAACAATACCATCAGAAGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGC 12433 Query 14657 TCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACT 14716 || | | | | ||| | |||||| | |||||||||| ||| || || || || || Sbjct 12434 TCGTTGTCATTTAATTTCTCCCAATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACA 12493 Query 14717 GTCCAAAAACTAGCAACAGC 14736 ||||||| ||| |||| Sbjct 12494 ACCCAAAAAGAAGCCTCAGC 12513 >SEQ11801 Length=23874 Score = 122 bits (134), Expect = 8e-23 Identities = 207/297 (70%), Gaps = 5/297 (2%) Strand=Plus/Minus Query 14442 TAAATAAATGTTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14499 ||||||||| | |||| || | || | ||| ||| || || ||||| | | |||||| Sbjct 20017 TAAATAAATATACCTT-TCGTCATAATCCTT--AATATAGGTGTCAATCAAGATGCTATA 19961 Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14559 |||||| || || | ||| |||||||| || ||||| || || || ||||||||||| | Sbjct 19960 CATTTCGGAATGGACGTTCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCAGC 19901 Query 14560 CCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||| || ||| | || | || | ||||| || ||||| ||||||||| ||| Sbjct 19900 AACTTGAACTTCTTTGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGC 19841 Query 14620 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCA 14679 ||||| || || || || | |||| |||| | |||| | | | | ||| | ||| Sbjct 19840 AGCAAAGAAAGCTAAGATATGCTTAAGAAAGAAACGCTCGTTTTCTTTCAATTTCTCCCA 19781 Query 14680 ATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGC 14736 ||| | |||||||||| ||| || || || || || ||| ||| ||| |||| Sbjct 19780 ATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACAACCCAGAAAGAAGCCTCAGC 19724 Score = 118 bits (130), Expect = 1e-21 Identities = 230/337 (68%), Gaps = 2/337 (1%) Strand=Plus/Minus Query 14029 TAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 14088 ||| || | ||| |||| || || |||||||| ||||| | | ||||||||||| | Sbjct 20486 TAGCAAACGATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAG 20427 Query 14089 TAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTA 14147 || || |||| || || | ||| || |||||||| || ||||| || ||| Sbjct 20426 GAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTA 20368 Query 14148 TAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACG 14207 |||| ||||| || ||||| || | | | |||| ||| || | || | Sbjct 20367 TAATTTCAATAATACGTTGCTTAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATG 20308 Query 14208 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 |||| |||||||| | |||||||| | | ||| | ||| || ||||||||||| || Sbjct 20307 CAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAT 20248 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 ||| | || |||| |||||||| || || ||||| || ||| || ||||| | Sbjct 20247 GCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAAAATATAC 20188 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAA 14364 | ||||| |||||||| || || | ||||| ||||| Sbjct 20187 CTTCAACCGCAGCAAAAGCAATGATACGTTCACCAAA 20151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482194010836560