Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23413 150 2e-31
SEQ14824 150 2e-31
SEQ11801 131 2e-25
>SEQ23413
Length=15718
Score = 150 bits (166), Expect = 2e-31
Identities = 296/433 (68%), Gaps = 6/433 (1%)
Strand=Plus/Plus
Query 13689 AGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTC 13748
|| || | ||| || | |||||| | ||| || |||||||||||||| | | ||||||
Sbjct 607 AGCTCAACTAGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTC 666
Query 13749 ATACCTATTAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807
||||| | || || |||| || || | ||| || |||||||| || |||||
Sbjct 667 ATACCAAGGAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGC 725
Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
||| ||||||| ||||| | ||||| ||| | | | ||||| ||| ||
Sbjct 726 ATCTGTTATAATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACAT 785
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
| || ||||| |||||||| | |||||||| | | ||| | ||| || ||||||||
Sbjct 786 AAGGCATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGT 845
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAA 13985
||| || |||| | || |||| |||||||| || || |||||||| | | | |||
Sbjct 846 TAAACCAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAA 905
Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045
| ||||| || ||||| |||||||| || || | ||||| ||||| ||| ||||
Sbjct 906 A--AATATACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTA 963
Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105
|| ||||| | |||||||||| || || | ||| || ||||||
Sbjct 964 GAAGAAATCCAAGATAGTGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATA 1023
Query 14106 GCATTAAATAAAT 14118
|||||||| ||||
Sbjct 1024 GCATTAAACAAAT 1036
Score = 125 bits (138), Expect = 7e-24
Identities = 208/297 (70%), Gaps = 5/297 (2%)
Strand=Plus/Plus
Query 14110 TAAATAAATATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCTATA 14167
|||||||| || |||| |||| | | ||| | || | || ||||| | | ||||||
Sbjct 1085 TAAATAAACATACCTT-TCTTCATGATCCTTAACAT--AAGTGTCAATCAAGATGCTATA 1141
Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227
|||||| || || | ||||| || ||||| ||||| || || |||||||||||||| |
Sbjct 1142 CATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTCAGT 1201
Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287
||| ||||| | || | || | ||||| || ||||| ||||||||| |||
Sbjct 1202 AACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGC 1261
Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCA 14347
||||| || || || || | |||||||| || |||| | | || | ||| | |||
Sbjct 1262 AGCAAAGAAAGCTAAGATATGCTTAATAAAATAACGCTCGTTGTCATTCAATTTCTCCCA 1321
Query 14348 ATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404
||| |||||||||| ||| || || || || || ||||||| ||| ||||
Sbjct 1322 ATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACAACCCAAAAAGAAGCCTCAGC 1378
>SEQ14824
Length=19491
Score = 150 bits (166), Expect = 2e-31
Identities = 296/433 (68%), Gaps = 6/433 (1%)
Strand=Plus/Plus
Query 13689 AGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTC 13748
|| || | ||| || | |||||| | ||| || |||||||||||||| | | ||||||
Sbjct 4943 AGCTCAACTAGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTC 5002
Query 13749 ATACCTATTAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807
||||| | || || |||| || || | ||| || |||||||| || |||||
Sbjct 5003 ATACCAAGGAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGC 5061
Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
||| ||||||| ||||| | ||||| ||| | | | ||||| ||| ||
Sbjct 5062 ATCTGTTATAATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACAT 5121
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
| || ||||| |||||||| | |||||||| | | ||| | ||| || ||||||||
Sbjct 5122 AAGGCATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGT 5181
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAA 13985
||| || |||| | || |||| |||||||| || || |||||||| | | | |||
Sbjct 5182 TAAACCAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAA 5241
Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045
| ||||| || ||||| |||||||| || || | ||||| ||||| ||| ||||
Sbjct 5242 A--AATATACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTA 5299
Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105
|| ||||| | |||||||||| || || | ||| || ||||||
Sbjct 5300 GAAGAAATCCAAGATAGTGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATA 5359
Query 14106 GCATTAAATAAAT 14118
|||||||| ||||
Sbjct 5360 GCATTAAACAAAT 5372
Score = 150 bits (166), Expect = 2e-31
Identities = 296/433 (68%), Gaps = 6/433 (1%)
Strand=Plus/Plus
Query 13689 AGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTC 13748
|| || | ||| || | |||||| | ||| || |||||||||||||| | | ||||||
Sbjct 11742 AGCTCAACTAGCAAACGATCAGCGACAAATTCGATATATTGAGACATGAGTTTGCAATTC 11801
Query 13749 ATACCTATTAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807
||||| | || || |||| || || | ||| || |||||||| || |||||
Sbjct 11802 ATACCAAGGAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGC 11860
Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
||| ||||||| ||||| | ||||| ||| | | | ||||| ||| ||
Sbjct 11861 ATCTGTTATAATTTCAATAATACGTTGCTTAGATGGACGTTGCACCAAATGTTGAAACAT 11920
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
| || ||||| |||||||| | |||||||| | | ||| | ||| || ||||||||
Sbjct 11921 AAGGCATGCAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGT 11980
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAA 13985
||| || |||| | || |||| |||||||| || || |||||||| | | | |||
Sbjct 11981 TAAACCAGGCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAA 12040
Query 13986 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTG 14045
| ||||| || ||||| |||||||| || || | ||||| ||||| ||| ||||
Sbjct 12041 A--AATATACCTTCAACAGCAGCAAAAGCAATGATACGTTCACCAAAGTTTGCACTTTTA 12098
Query 14046 TTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATA 14105
|| ||||| | |||||||||| || || | ||| || ||||||
Sbjct 12099 GAAGAAATCCAAGATAGTGCCCATTCAGCCTTACGCTTTACCGCTGGCATGGTCTCAATA 12158
Query 14106 GCATTAAATAAAT 14118
|||||||| ||||
Sbjct 12159 GCATTAAACAAAT 12171
Score = 127 bits (140), Expect = 2e-24
Identities = 211/300 (70%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCT 14164
|||||| |||| || |||| |||| | | ||| | || | || ||||| | | |||
Sbjct 5419 CATTAA-TAAACATACCTT-TCTTCATGATCCTTAACAT--AGGTGTCAATCAAGATGCT 5474
Query 14165 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224
||||||||| || || | ||||| || ||||| ||||| || || ||||||||||||||
Sbjct 5475 ATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTC 5534
Query 14225 CGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284
| ||| ||||| | || | || | ||||| || ||||| |||||||||
Sbjct 5535 AGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGA 5594
Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14344
||| ||||| || || || || | ||||||||||| |||| | | || | ||| |
Sbjct 5595 AGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGCTCGTTGTCATTTAATTTCTC 5654
Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404
|||||| |||||||||| ||| || || || || || ||||||| ||| ||||
Sbjct 5655 CCAATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACAACCCAAAAAGAAGCCTCAGC 5714
Score = 127 bits (140), Expect = 2e-24
Identities = 211/300 (70%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 14107 CATTAAATAAATATTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCT 14164
|||||| |||| || |||| |||| | | ||| | || | || ||||| | | |||
Sbjct 12218 CATTAA-TAAACATACCTT-TCTTCATGATCCTTAACAT--AGGTGTCAATCAAGATGCT 12273
Query 14165 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224
||||||||| || || | ||||| || ||||| ||||| || || ||||||||||||||
Sbjct 12274 ATACATTTCTGAATGCACATTTTCAATTGCTATTTGAAATCCGTAGAAGCATCTAGCTTC 12333
Query 14225 CGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284
| ||| ||||| | || | || | ||||| || ||||| |||||||||
Sbjct 12334 AGTAACTTGAACTTCTTGGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGA 12393
Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTT 14344
||| ||||| || || || || | ||||||||||| |||| | | || | ||| |
Sbjct 12394 AGCAGCAAAGAAAGCTAAGATATGCTTAATAAAGTAACGCTCGTTGTCATTTAATTTCTC 12453
Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404
|||||| |||||||||| ||| || || || || || ||||||| ||| ||||
Sbjct 12454 CCAATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACAACCCAAAAAGAAGCCTCAGC 12513
>SEQ11801
Length=23874
Score = 131 bits (144), Expect = 2e-25
Identities = 209/297 (70%), Gaps = 5/297 (2%)
Strand=Plus/Minus
Query 14110 TAAATAAATATTCCTTCTCTT--TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATA 14167
||||||||||| |||| || | || | ||| ||| || || ||||| | | ||||||
Sbjct 20017 TAAATAAATATACCTT-TCGTCATAATCCTT--AATATAGGTGTCAATCAAGATGCTATA 19961
Query 14168 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGA 14227
|||||| || || | ||| |||||||| || ||||| || || |||||||||||||| |
Sbjct 19960 CATTTCGGAATGGACGTTCTCCATAGCAATTTGAAATCCGTAGAAGCATCTAGCTTCAGC 19901
Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287
||| ||||| | || | || | ||||| || ||||| ||||||||| |||
Sbjct 19900 AACTTGAACTTCTTTGCTGAAGCGCTCCACTAAATTCTCGTTAACAATACCATCAGAAGC 19841
Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCA 14347
||||| || || || || | |||| |||| | |||| | | || | ||| | |||
Sbjct 19840 AGCAAAGAAAGCTAAGATATGCTTAAGAAAGAAACGCTCGTTTTCTTTCAATTTCTCCCA 19781
Query 14348 ATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404
||| |||||||||| ||| || || || || || ||| ||| ||| ||||
Sbjct 19780 ATCATCCAAATCCTTAGCAAGGTCAACCTCTTCCACAACCCAGAAAGAAGCCTCAGC 19724
Score = 125 bits (138), Expect = 7e-24
Identities = 234/339 (69%), Gaps = 6/339 (2%)
Strand=Plus/Minus
Query 13697 TAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTAT 13756
||| || | ||| |||| ||| || |||||||| ||||| | | ||||||||||| |
Sbjct 20486 TAGCAAACGATCGGCAACAAATTCTATATATTGGGACATAAGTTTGCAATTCATACCAAG 20427
Query 13757 TAGTTTTACAGG-AATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTA 13815
|| || |||| || || | ||| || |||||||| || ||||| ||| |||
Sbjct 20426 GAGATTAACAGACAAAGCTACAG-TTAGGAACTCTTTTTCAATTTTAACAGCATCTGTTA 20368
Query 13816 TAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACG 13875
|||| ||||| | ||||| || | | | |||| ||| || | || |
Sbjct 20367 TAATTTCAATAATACGTTGCTTAGATGGCCGTTGCACCAAGTGTTGAAACATAAGGCATG 20308
Query 13876 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935
|||| |||||||| | |||||||| | | ||| | ||| || ||||||||||| ||
Sbjct 20307 CAAAGTCACAATGTAATCCCTCATCACGAGAAATTAATTCATTAGAAAATGTTAAACCAT 20248
Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAAAAGAATAT 13993
||| | || |||| |||||||| || || |||||||| | | | |||| |||||
Sbjct 20247 GCAAGATGCCACGTTGCTTTAACCAGAAAATAGCAGCAAAACTTCCACTGAAA--AATAT 20190
Query 13994 TCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAA 14032
|| ||||| |||||||| || || | ||||| |||||
Sbjct 20189 ACCTTCAACCGCAGCAAAAGCAATGATACGTTCACCAAA 20151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479577233482800
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