Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_004681.1
Length=75931
Score E
Sequences producing significant alignments: (Bits) Value
seq4741 302 2e-77
>seq4741
Length=15116
Score = 302 bits (334), Expect = 2e-77
Identities = 538/770 (70%), Gaps = 25/770 (3%)
Strand=Plus/Plus
Query 66683 GTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGG 66742
|| ||| |||||||||| |||| ||||| ||| ||||| ||||| || || ||
Sbjct 13623 GTGATTTCCACCGGCTCCATCGGGCTGGATATCGCGCTGGGGATCGGCGGCATGCCCCGG 13682
Query 66743 GGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCAC 66802
||||| | || || ||||| ||||| ||| || || ||| | || || || ||
Sbjct 13683 GGCCGCATTGTCGAGATCTATGGCCCGGAAAGCTCGGGCAAGACCACACTTGCCCTGCAT 13742
Query 66803 GCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCC 66862
| ||||| | || |||||| || |||| || ||||| |||||| || || || |
Sbjct 13743 GTTCTGGCCGAAGCCCAGAAGAAGGGCGGCACCGTCGCCTTCATCGATGCCGAACATGCG 13802
Query 66863 CTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAG 66922
|| ||||||| |||||| ||||| || | ||||| |||| | || |||
Sbjct 13803 CTCGACCCCGGTTACGCCCGCAAACTCGGCGTCAATATCGACGACCTTCTCCTGAGCCAG 13862
Query 66923 CCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTG 66982
||||| | ||||| ||||| ||||| |||| || |||||| || |||| ||
Sbjct 13863 CCGGATGCCGGCGAACAGGCTCTGGAAATCGCCGATACGCTCGTCCGTTCCGGCGCCGTG 13922
Query 66983 TCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGAC 67042
| | | ||||| ||||| || ||||| || || |||||||||||||| |||||||||
Sbjct 13923 GACGTTCTGGTCGTGGACTCCGTTGCGGCTCTCGTCCCGCGCGCCGAGCTTGAAGGCGAC 13982
Query 67043 ATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTC 67102
|| || ||||| || || || |||||||| || |||||| ||||| ||||||||||
Sbjct 13983 ATGGGCGACAGCCATGTTGGTCTGCACGCCCGTCTCATGAGCCAGGCTCTGCGCAAGCTG 14042
Query 67103 ACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAG 67162
|| || || |||| || |||||||||| | ||| | |||||| | || |||
Sbjct 14043 ACGGGAACGGTCTCGCGCTCCAACACGCTCGTGATCTTCCTGAACCAGATCCGTATGAAA 14102
Query 67163 ATCGGCAACGTGGGCTACGGC---CCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGG 67219
||||| |||| | |||| ||| ||||| ||||||||||| || || |||
Sbjct 14103 ATCGG---CGTGATGTTCGGCAATCCG---GAGACGACCACGGGCGGCAACGC-CTGA-A 14154
Query 67220 TTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGA-AGGCGATGA 67278
|||||| |||| ||||| || | | || |||| | | || | ||||| | || ||
Sbjct 14155 TTCTACCCCTCCATCCGCCTGAA--TACGCCGCAGCCGCTCC-ACAAGGACAAAGGACGA 14211
Query 67279 GGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCG 67338
|| || |||| ||| ||||| || || ||||||||||||||| ||||||| ||| |||
Sbjct 14212 GGTTG-CGGC-ACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCCCCCCCGTTCCG 14269
Query 67339 CAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCG 67397
| | ||||||| | || |||| || || |||||| || || || |||||| ||||
Sbjct 14270 TCAGGTCGAGTTCGACATCATGTATGGCGAAGGCATC-AGCAAGATGGGCGAACTGCTCG 14328
Query 67398 ACCTGGCCGTGTCGCAGGG---CCTGGTGAAGAAGTCGGGCGCCTGGTTC 67444
| |||| ||| | |||| | | || |||| || ||||| ||||||
Sbjct 14329 ATCTGGGCGT---GAAGGGCAACATCGTCGAGAAATCCGGCGCATGGTTC 14375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242779985010104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |