Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 82.4 6e-11
seq2607 82.4 6e-11
>SEQ18352
Length=541547
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873
|||||| || | | | ||||| || | ||||||||||| |||||||| ||||| |
Sbjct 402429 TCCTCCGCGAAGACGCAGCACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGA 402370
Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933
| || | ||||||| ||||| || ||| |||| || | || ||||| ||
Sbjct 402369 TAAAGTGCGACCATCCTCCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGG 402310
Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993
| ||||||||| || ||| || ||| || | | | | |||| |||||
Sbjct 402309 AATGCCCTCTTTATCTTGAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGAC 402250
Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| || |||||||| || ||||| ||||||||||| |||||
Sbjct 402249 CTCTAAGGTGATAGTTTTACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202
>seq2607
Length=223464
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889
||||||| ||| | || || |||||||||||||| ||||| | || ||| | ||
Sbjct 124820 AACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCT 124879
Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949
|||| |||||||| ||| |||| | | |||||||| || | |||||||||||
Sbjct 124880 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCC 124939
Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009
||| || ||| || | ||| ||| || || ||| || | ||| |||||
Sbjct 124940 TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTC 124999
Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| || |||| || || || || || ||||||||
Sbjct 125000 TTGCCCGTTAGGGTCTTAACGAATATCTGCATTTT 125034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414445767379948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |