Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 82.4 6e-11 seq2607 82.4 6e-11 >SEQ18352 Length=541547 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873 |||||| || | | | ||||| || | ||||||||||| |||||||| ||||| | Sbjct 402429 TCCTCCGCGAAGACGCAGCACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGA 402370 Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933 | || | ||||||| ||||| || ||| |||| || | || ||||| || Sbjct 402369 TAAAGTGCGACCATCCTCCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGG 402310 Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993 | ||||||||| || ||| || ||| || | | | | |||| ||||| Sbjct 402309 AATGCCCTCTTTATCTTGAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGAC 402250 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | ||| || |||||||| || ||||| ||||||||||| ||||| Sbjct 402249 CTCTAAGGTGATAGTTTTACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202 >seq2607 Length=223464 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889 ||||||| ||| | || || |||||||||||||| ||||| | || ||| | || Sbjct 124820 AACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCT 124879 Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949 |||| |||||||| ||| |||| | | |||||||| || | ||||||||||| Sbjct 124880 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCC 124939 Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009 ||| || ||| || | ||| ||| || || ||| || | ||| ||||| Sbjct 124940 TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTC 124999 Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || || |||| || || || || || |||||||| Sbjct 125000 TTGCCCGTTAGGGTCTTAACGAATATCTGCATTTT 125034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414445767379948