Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value SEQ17304 86.0 3e-12 >SEQ17304 Length=5410 Score = 86.0 bits (94), Expect = 3e-12 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 42910 TCCCTGATCAGTTTCTTGAAGGTAAATTCATCACCACCAAG--TCTGGCTATGCAGAAAT 42967 ||||| | | ||| || ||||| || |||| ||| || | | |||||||| || | Sbjct 1736 TCCCTAGTTAATTTTTTAAAGGTGAACTCATTTCCATTAATCTTTTTGCTATGCAAAAGT 1795 Query 42968 CGCCGGGCTCAACAGCTTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAG 43027 | || | ||||||| || | |||||||| | ||||| || || || || || || | Sbjct 1796 CTCCCGTATCAACAGGTTCATTAGGGTCAATTAATATTAAAATGCCTTCTGGGAAGCTTG 1855 Query 43028 GTTTGGAACCTGTTGGTGCGGTCATTGAGTTACCTTCAACCTCAAGCCAGAATGCAGAGT 43087 |||| | ||| ||| || ||||| |||| |||||| || || | ||| || | || Sbjct 1856 GTTTTGTTCCTTGTGGAGCTGTCATAGAGTGACCTTCTACTTCTAACCAAAAGGATCTGT 1915 Query 43088 CACTGGCTTTTTTGGTTGT 43106 |||||||||| || | ||| Sbjct 1916 CACTGGCTTTCTTTGCTGT 1934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200472952625154