Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 122 6e-23
seq2607 107 1e-18
seq5553 104 2e-17
>SEQ18352
Length=541547
Score = 122 bits (134), Expect = 6e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGT 43970
||||||||| || || ||| || |||||||||||||| | | || || || |||| |
Sbjct 402411 CACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGATAAAGTG-CGACCATCCT 402353
Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030
|||||||||| || ||||| || | ||||| || || |||| | || |||||||||
Sbjct 402352 CCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGGAATGCCCTCTTTATCTT 402293
Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090
||| || ||| || | ||| | |||| | ||||| || || | || || ||||
Sbjct 402292 GAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGACCTCTAAGGTGATAGTTT 402233
Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||||| |||||||| ||||| || |||||
Sbjct 402232 TACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202
Score = 114 bits (126), Expect = 9e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| || ||| || || ||||| || |||||| | ||| ||||
Sbjct 401958 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 401899
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || ||||||||||| ||||| ||||| |||| | || ||||| ||
Sbjct 401898 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401839
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| ||||| | ||| | |||| | || || || || | || || ||
Sbjct 401838 TTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACCTCTAAGGTGATCGT 401779
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || ||||||||||| || || || |||||
Sbjct 401778 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401746
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| |||||||| || || || ||||| ||||| || || ||| || ||||
Sbjct 390280 AAGACCAAATGGAGAGTTGATTCCTTTTGGATATTGTAGTCAGATAAGGTGCGACCATCT 390221
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
||||| || || || ||||| ||||| || || || || | || | |||||||||||||
Sbjct 390220 TCCAACTGCTTACCAGCAAAAATCAAACGCTGTTGATCTGGTGGAATACCTTCTTTATCT 390161
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||||| |||||| | | | |||||| | |||||| || || | || || |||
Sbjct 390160 TGGATTTTAGCTTTGACGTTCTCGATAGTATCAGACGGCTCGACCTCTAAGGTGATAGTT 390101
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||||||| |||||||| ||||| || |||||
Sbjct 390100 TTACCGGTCAAAGTCTTTACAAAAATCTGCAT 390069
Score = 105 bits (116), Expect = 5e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| | || || |||||||||||||||||| | ||| ||||
Sbjct 401046 TAATACCAAATGCAAAGTAGATTCCTTTTGAATATTATAATCGGAGAGAGTACGTCCATC 400987
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || ||||||||||| ||||| || || |||| | || ||||| ||
Sbjct 400986 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400927
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| || || | ||| |||| | || || || || | || || ||
Sbjct 400926 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 400867
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || ||||||||||| || || || |||||
Sbjct 400866 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 400834
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| || ||| || || ||||| || |||||| | ||| ||||
Sbjct 400134 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 400075
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || ||||||||||| ||||| || || |||| | || ||||| ||
Sbjct 400074 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400015
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| || || | ||| |||| | || || || || | || || ||
Sbjct 400014 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATAGT 399955
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || || |||||||| ||||| || |||||
Sbjct 399954 TTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| || ||| || || ||||| || |||||| | ||| ||||
Sbjct 400590 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 400531
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || ||||||||||| ||||| || || |||| | || ||||| ||
Sbjct 400530 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400471
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| || || | ||| |||| | || || || || | || || ||
Sbjct 400470 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 400411
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || ||||||||||| || || || |||||
Sbjct 400410 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 400378
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| | || || || |||||||| |||||| | || ||||
Sbjct 401274 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATC 401215
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || ||||||||||| ||||| ||||| |||| | || ||||| ||
Sbjct 401214 TTCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401155
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| ||||| | ||| | |||| | || || || || | ||||| ||
Sbjct 401154 TTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGT 401095
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| ||||| | || || |||||||| |||||
Sbjct 401094 CTTGCCGGTCAGGGTTTTAACAAATATCTGCAT 401062
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| || ||| || || ||||| || |||||| | ||| ||||
Sbjct 401502 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 401443
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || ||||||||||| ||||| || || |||| | || ||||| ||
Sbjct 401442 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 401383
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| || || | ||| |||| | || || || || | || || ||
Sbjct 401382 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 401323
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || ||||||||||| || || || |||||
Sbjct 401322 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401290
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| | || || || |||||||| |||||| | ||| ||||
Sbjct 400818 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATC 400759
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||| || || || || ||||| ||||| ||||| |||| | || ||||||||
Sbjct 400758 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 400699
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| ||| || ||||| | ||| || || | | || || || | |||||||||
Sbjct 400698 TTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAACGTAATTGT 400639
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || || || || || |||||||| |||||
Sbjct 400638 TTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 400606
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| | || || ||||||||||| ||||| | ||| ||||
Sbjct 400362 TAATACCAAATGCAAAGTAGATTCCTTTTGAATATTGTAATCAGAGAGGGTACGTCCATC 400303
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || || || ||||| ||||| ||||| |||| | || ||||||||
Sbjct 400302 TTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 400243
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| ||| || ||||| | ||| || || | | || || || | ||||| ||
Sbjct 400242 TTGAATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATAGT 400183
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || || || || || |||||||| |||||
Sbjct 400182 TTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 400150
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| | || || || |||||||| |||||| | ||| ||||
Sbjct 401730 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATC 401671
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||| || || || || ||||| ||||| ||||| |||| | || ||||||||
Sbjct 401670 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 401611
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| ||| || ||||| | ||| || || | | || || || | ||||||||
Sbjct 401610 TTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAATGTAATTGT 401551
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || || || || || |||||||| |||||
Sbjct 401550 TTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 401518
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| || ||| ||||| || || || || || | || ||||
Sbjct 402186 TAATACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATC 402127
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
||||||||||| || || || ||||| ||||| ||||| |||| | |||||||||||
Sbjct 402126 TTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATC 402067
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
| |||||| ||||| | ||| || || | | || || || | ||||| ||
Sbjct 402066 TTGAATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGT 402007
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| || || || || || |||||||| |||||
Sbjct 402006 TTTGCCAGTCAAGGTTTTTACAAATATCTGCAT 401974
>seq2607
Length=223464
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|||||||| || || || || |||||||||||||||||| ||| || ||||
Sbjct 124820 AACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCT 124879
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
||||||||||| || ||||| ||||| |||||||| || |||| | || ||||| ||
Sbjct 124880 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCC 124939
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||| || |||||| | | | ||| || | || ||||| || | || || ||
Sbjct 124940 TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTC 124999
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || |||| ||||| || ||||| |||||
Sbjct 125000 TTGCCCGTTAGGGTCTTAACGAATATCTGCAT 125031
>seq5553
Length=18996
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|||||||| || || || || |||||||||||||||||| ||| || ||||
Sbjct 18570 AACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCT 18511
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
||||||||||| || ||||| ||||| |||||||| || |||| | || ||||| ||
Sbjct 18510 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCC 18451
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||| || |||||| | | | ||| || | || || || || | || || ||
Sbjct 18450 TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCAACCTCAAGGGTGATGGTC 18391
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || |||| ||||| || ||||| |||||
Sbjct 18390 TTGCCCGTTAGGGTCTTAACGAATATCTGCAT 18359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354668889713016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |