Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 122 6e-23 seq2607 107 1e-18 seq5553 104 2e-17 >SEQ18352 Length=541547 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGT 43970 ||||||||| || || ||| || |||||||||||||| | | || || || |||| | Sbjct 402411 CACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGATAAAGTG-CGACCATCCT 402353 Query 43971 CCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTG 44030 |||||||||| || ||||| || | ||||| || || |||| | || ||||||||| Sbjct 402352 CCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGGAATGCCCTCTTTATCTT 402293 Query 44031 AAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTT 44090 ||| || ||| || | ||| | |||| | ||||| || || | || || |||| Sbjct 402292 GAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGACCTCTAAGGTGATAGTTT 402233 Query 44091 TACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||||| |||||||| ||||| || ||||| Sbjct 402232 TACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || ||| || || ||||| || |||||| | ||| |||| Sbjct 401958 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 401899 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || ||||||||||| ||||| ||||| |||| | || ||||| || Sbjct 401898 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401839 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||||| | ||| | |||| | || || || || | || || || Sbjct 401838 TTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACCTCTAAGGTGATCGT 401779 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || ||||||||||| || || || ||||| Sbjct 401778 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401746 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || |||||||| || || || ||||| ||||| || || ||| || |||| Sbjct 390280 AAGACCAAATGGAGAGTTGATTCCTTTTGGATATTGTAGTCAGATAAGGTGCGACCATCT 390221 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 ||||| || || || ||||| ||||| || || || || | || | ||||||||||||| Sbjct 390220 TCCAACTGCTTACCAGCAAAAATCAAACGCTGTTGATCTGGTGGAATACCTTCTTTATCT 390161 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||||| |||||| | | | |||||| | |||||| || || | || || ||| Sbjct 390160 TGGATTTTAGCTTTGACGTTCTCGATAGTATCAGACGGCTCGACCTCTAAGGTGATAGTT 390101 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||||||| |||||||| ||||| || ||||| Sbjct 390100 TTACCGGTCAAAGTCTTTACAAAAATCTGCAT 390069 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| | || || |||||||||||||||||| | ||| |||| Sbjct 401046 TAATACCAAATGCAAAGTAGATTCCTTTTGAATATTATAATCGGAGAGAGTACGTCCATC 400987 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || ||||||||||| ||||| || || |||| | || ||||| || Sbjct 400986 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400927 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| || || | ||| |||| | || || || || | || || || Sbjct 400926 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 400867 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || ||||||||||| || || || ||||| Sbjct 400866 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 400834 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || ||| || || ||||| || |||||| | ||| |||| Sbjct 400134 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 400075 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || ||||||||||| ||||| || || |||| | || ||||| || Sbjct 400074 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400015 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| || || | ||| |||| | || || || || | || || || Sbjct 400014 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATAGT 399955 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || |||||||| ||||| || ||||| Sbjct 399954 TTTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || ||| || || ||||| || |||||| | ||| |||| Sbjct 400590 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 400531 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || ||||||||||| ||||| || || |||| | || ||||| || Sbjct 400530 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 400471 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| || || | ||| |||| | || || || || | || || || Sbjct 400470 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 400411 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || ||||||||||| || || || ||||| Sbjct 400410 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 400378 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| | || || || |||||||| |||||| | || |||| Sbjct 401274 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATC 401215 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || ||||||||||| ||||| ||||| |||| | || ||||| || Sbjct 401214 TTCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTC 401155 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||||| | ||| | |||| | || || || || | ||||| || Sbjct 401154 TTGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGT 401095 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || ||||| | || || |||||||| ||||| Sbjct 401094 CTTGCCGGTCAGGGTTTTAACAAATATCTGCAT 401062 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || ||| || || ||||| || |||||| | ||| |||| Sbjct 401502 TAATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATC 401443 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || ||||||||||| ||||| || || |||| | || ||||| || Sbjct 401442 TTCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTC 401383 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| || || | ||| |||| | || || || || | || || || Sbjct 401382 TTGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATCGT 401323 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || ||||||||||| || || || ||||| Sbjct 401322 TTTGCCTGTTAAAGTCTTAACGAAAATCTGCAT 401290 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| | || || || |||||||| |||||| | ||| |||| Sbjct 400818 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATC 400759 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||| || || || || ||||| ||||| ||||| |||| | || |||||||| Sbjct 400758 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 400699 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | ||| || ||||| | ||| || || | | || || || | ||||||||| Sbjct 400698 TTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAACGTAATTGT 400639 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || || || || |||||||| ||||| Sbjct 400638 TTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 400606 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| | || || ||||||||||| ||||| | ||| |||| Sbjct 400362 TAATACCAAATGCAAAGTAGATTCCTTTTGAATATTGTAATCAGAGAGGGTACGTCCATC 400303 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || || || ||||| ||||| ||||| |||| | || |||||||| Sbjct 400302 TTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 400243 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | ||| || ||||| | ||| || || | | || || || | ||||| || Sbjct 400242 TTGAATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATAGT 400183 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || || || || |||||||| ||||| Sbjct 400182 TTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 400150 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| | || || || |||||||| |||||| | ||| |||| Sbjct 401730 TAATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGAGTACGTCCATC 401671 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||| || || || || ||||| ||||| ||||| |||| | || |||||||| Sbjct 401670 TTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTATC 401611 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | ||| || ||||| | ||| || || | | || || || | |||||||| Sbjct 401610 TTGAATCTTGGCCTTGACGTTCTCAATTGTGTCAGATGCTTCGACTTCCAATGTAATTGT 401551 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || || || || |||||||| ||||| Sbjct 401550 TTTGCCAGTCAAGGTTTTAACAAATATCTGCAT 401518 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 ||| |||||||| || ||| ||||| || || || || || | || |||| Sbjct 402186 TAATACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATC 402127 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 ||||||||||| || || || ||||| ||||| ||||| |||| | ||||||||||| Sbjct 402126 TTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATC 402067 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 | |||||| ||||| | ||| || || | | || || || | ||||| || Sbjct 402066 TTGAATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGT 402007 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || || || || |||||||| ||||| Sbjct 402006 TTTGCCAGTCAAGGTTTTTACAAATATCTGCAT 401974 >seq2607 Length=223464 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 |||||||| || || || || |||||||||||||||||| ||| || |||| Sbjct 124820 AACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCT 124879 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 ||||||||||| || ||||| ||||| |||||||| || |||| | || ||||| || Sbjct 124880 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCC 124939 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||| || |||||| | | | ||| || | || ||||| || | || || || Sbjct 124940 TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACCTCAAGGGTGATGGTC 124999 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || |||| ||||| || ||||| ||||| Sbjct 125000 TTGCCCGTTAGGGTCTTAACGAATATCTGCAT 125031 >seq5553 Length=18996 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 |||||||| || || || || |||||||||||||||||| ||| || |||| Sbjct 18570 AACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAATGTGCGACCATCT 18511 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 ||||||||||| || ||||| ||||| |||||||| || |||| | || ||||| || Sbjct 18510 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCCTCTTTGTCC 18451 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||| || |||||| | | | ||| || | || || || || | || || || Sbjct 18450 TGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCAACCTCAAGGGTGATGGTC 18391 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || |||| ||||| || ||||| ||||| Sbjct 18390 TTGCCCGTTAGGGTCTTAACGAATATCTGCAT 18359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354668889713016