Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 104 2e-17
seq9966 91.5 1e-13
SEQ18478 86.0 5e-12
seq2607 82.4 6e-11
>SEQ18352
Length=541547
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
|| |||||||| ||||| ||||| || ||||||||||| || | || | ||||
Sbjct 390508 AATACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCT 390449
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
||||| || || || || |||| | | ||| ||||| ||| | ||| ||||||||
Sbjct 390448 TCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCT 390389
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
|||||| || || | ||| || ||| ||||| ||||| |||||||||
Sbjct 390388 TGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTT 390329
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| ||||| || |||||||| || |||||
Sbjct 390328 TTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 390297
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || |||| | ||| |||||||||| |||||||| ||||| ||||||||||||
Sbjct 390751 CCACCACGTAGACGCAATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAG 390692
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | |||||| | ||||||||| ||| | || | | ||||||||| ||
Sbjct 390691 AGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAAACGCTGTTGATCTGGAGGA 390632
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| ||| || |||||| | ||| || || || ||
Sbjct 390631 ATACCTTCTTTGTCTTGAATCTTAGCTTTCACATTTTCAATAGTGTCAGATGGCTCGACC 390572
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || ||||||||||| ||||| || || || || || |||||
Sbjct 390571 TCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 390525
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
||||||||||| | |||||||| || || |||||||| ||| | ||| | ||||
Sbjct 399905 AACACCAAATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCT 399846
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
|| | ||||||||| ||| | || || | |||||||| || | |||||||||||
Sbjct 399845 TCAAGTTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCT 399786
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
|||||| ||| || | | | | || || ||| ||||| || ||||||
Sbjct 399785 TGAATTTTAGATTTTACATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTT 399726
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| || ||||| ||||||||||| || |||||
Sbjct 399725 TTTCCAGTCAAAGTTTTGACAAATATCTGCAT 399694
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040
|||||| || | | || ||||||||| |||||||| || || || || || |||||
Sbjct 402429 TCCTCCGCGAAGACGCAGCACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGA 402370
Query 20041 CATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGG 20100
| ||| | ||| |||||||||||||| ||| |||| || | |||||||| ||
Sbjct 402369 TAAAGTGCGACCATCCTCCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGG 402310
Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160
| ||| ||||| || ||| || ||| || | ||| | ||| || ||
Sbjct 402309 AATGCCCTCTTTATCTTGAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGAC 402250
Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| | ||| || ||||| |||||||| || ||||||||||| |||||
Sbjct 402249 CTCTAAGGTGATAGTTTTACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || |||| | ||| ||||| || || |||||||| ||||| |||||||| ||
Sbjct 389383 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 389324
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| || | ||||||||| || || || || |||| | | |||||| || |||
Sbjct 389323 AACGTGCGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 389264
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||| || || || || || | ||| | ||| ||||| |
Sbjct 389263 ATGCCTTCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTCAACT 389204
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| |||||||||||||| ||||| || ||||| |||||||||||
Sbjct 389203 TCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTGCAT 389157
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
|| |||||||| ||||| |||||||| ||||||||||| || | || | ||||
Sbjct 402185 AATACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATCT 402126
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
||||||||||| || || |||| | | ||||| || || | ||||||||| ||
Sbjct 402125 TCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATCT 402066
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
|||||| || || | ||| | || | ||| ||||| |||||||||
Sbjct 402065 TGAATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGTT 402006
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| ||||| ||||| ||||| || |||||
Sbjct 402005 TTGCCAGTCAAGGTTTTTACAAATATCTGCAT 401974
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || |||| | ||| |||||||||| |||||||| ||||| ||||||||||||
Sbjct 389611 CCACCACGTAGACGCAATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAG 389552
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | |||||| | ||||||||| ||| | || | | |||||||| ||
Sbjct 389551 AGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 389492
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| ||| || ||| || | ||| | || || ||
Sbjct 389491 ATACCTTCTTTGTCTTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACC 389432
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || ||||||||||| ||||| || || || || || |||||
Sbjct 389431 TCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389385
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || |||| | ||| ||||| || || ||||||||||| || |||||||| ||| |
Sbjct 390067 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCGGAC 390008
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | |||||| | || ||||| || |||| | | ||| ||||| ||
Sbjct 390007 AAAGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGTGGA 389948
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| |||||||||||| ||||| || || | ||| | ||| |||||
Sbjct 389947 ATGCCTTCTTTGTCTTGGATTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTCAACC 389888
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| |||||||||||||| ||||| || || || || || |||||
Sbjct 389887 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389841
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
|| |||||||| ||||| ||||| || || |||||||||||| | ||| ||||
Sbjct 400133 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400074
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
||||||||||| || ||| | || | | |||||||| || | ||| ||||||||
Sbjct 400073 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 400014
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
|||||| || || | ||| ||| ||||| || | ||| || |||
Sbjct 400013 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATAGTT 399954
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| ||||| || || |||||||| |||||
Sbjct 399953 TTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||||||| | | ||||| |||| || ||||||||||||||||| |||||
Sbjct 399464 CCACCTCGTAAACGAAGGACCAAGTGTAAAGTGGATTCTTTTTGTATGTTATAATCAGAA 399405
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATA-AATAAGCCTCTGTTGATCGACGGG 20100
| || | |||||| | ||| || || ||| | | ||||| | |||||||| ||
Sbjct 399404 AGGGTGCGACCATCTTCAAGTTGCTTACCAGCAAATATTAAGCGT-TGTTGATCTGGTGG 399346
Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160
| |||||||||||| ||||||| || || | | | ||| ||||||
Sbjct 399345 AATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTTCGATGCTATCAGATGGTTCCAC 399286
Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| || ||||||||||| || || || || || || || ||||||||
Sbjct 399285 CTCCAAAGTGATGGTTTTGCCTGTTAATGTCTTCACGAAGATCTGCATTTT 399235
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
|| |||||||| | |||||||| || || || ||||||||| | || | ||||
Sbjct 401273 AATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCT 401214
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
||||||||||| || ||| | || | | ||||| || || | ||| ||||||||
Sbjct 401213 TCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCT 401154
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
|||||| || || | ||| | ||| ||||| ||| | ||||||||
Sbjct 401153 TGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGTC 401094
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||||||||| ||||| ||||| || |||||
Sbjct 401093 TTGCCGGTCAGGGTTTTAACAAATATCTGCAT 401062
>seq9966
Length=18433
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
||||| ||||| | |||||||||||| ||||| || || ||||| |||||||| |||
Sbjct 14123 CCTCCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGAT 14182
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| || |||||| | ||| ||||| || |||| | | |||||||| ||
Sbjct 14183 AAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 14242
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||| || || || ||||| ||||| | ||| | ||| ||| || |
Sbjct 14243 ATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACT 14302
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| || || || ||||||||||| ||||| || || || ||||||||
Sbjct 14303 TCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTT 14352
>SEQ18478
Length=82247
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || ||||| | |||||||||||| ||||| || || ||||| |||||||| |||
Sbjct 41412 CCACCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGAT 41471
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| || |||||| | ||| ||||| || |||| | | |||||||| ||
Sbjct 41472 AAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 41531
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||| || || || ||||| ||||| | ||| | ||| ||| || |
Sbjct 41532 ATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACT 41591
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|||| || || || ||||||||||| ||||| || || || ||||||||
Sbjct 41592 TCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTT 41641
>seq2607
Length=223464
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || |||| | ||||||||| || ||||| ||||| ||||| || || |||||| |
Sbjct 124805 CCACCACGTAGGCGCAACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGAC 124864
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| || | ||||||||||||||| || ||| |||| | | || ||||| ||
Sbjct 124865 AATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGA 124924
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| || |||||||| ||| || ||| || | | | || || ||||||
Sbjct 124925 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACC 124984
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
|| | ||| ||||| ||||| || | || || || || || ||||||||
Sbjct 124985 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAATATCTGCATTTT 125034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419458630876902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |