Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 104 2e-17 seq9966 91.5 1e-13 SEQ18478 86.0 5e-12 seq2607 82.4 6e-11 >SEQ18352 Length=541547 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || |||||||| ||||| ||||| || ||||||||||| || | || | |||| Sbjct 390508 AATACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATCT 390449 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 ||||| || || || || |||| | | ||| ||||| ||| | ||| |||||||| Sbjct 390448 TCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTCT 390389 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| || || | ||| || ||| ||||| ||||| ||||||||| Sbjct 390388 TGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGTT 390329 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| || |||||||| || ||||| Sbjct 390328 TTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 390297 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||| | ||| |||||||||| |||||||| ||||| |||||||||||| Sbjct 390751 CCACCACGTAGACGCAATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAG 390692 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| | ||||||||| ||| | || | | ||||||||| || Sbjct 390691 AGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAAACGCTGTTGATCTGGAGGA 390632 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||| || |||||| | ||| || || || || Sbjct 390631 ATACCTTCTTTGTCTTGAATCTTAGCTTTCACATTTTCAATAGTGTCAGATGGCTCGACC 390572 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || ||||||||||| ||||| || || || || || ||||| Sbjct 390571 TCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 390525 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 ||||||||||| | |||||||| || || |||||||| ||| | ||| | |||| Sbjct 399905 AACACCAAATGCAAAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCATCT 399846 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || | ||||||||| ||| | || || | |||||||| || | ||||||||||| Sbjct 399845 TCAAGTTGTTTGCCAGCAAAGATTAGACGTTGTTGATCTGGCGGTATACCTTCTTTGTCT 399786 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | | | | || || ||| ||||| || |||||| Sbjct 399785 TGAATTTTAGATTTTACATTTTCTATTGTGTCCGAAGATTCTACTTCCAAAGTGATGGTT 399726 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || ||||| ||||||||||| || ||||| Sbjct 399725 TTTCCAGTCAAAGTTTTGACAAATATCTGCAT 399694 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040 |||||| || | | || ||||||||| |||||||| || || || || || ||||| Sbjct 402429 TCCTCCGCGAAGACGCAGCACCAAATGGAGTGTAGACTCCTTCTGAATATTATAATCAGA 402370 Query 20041 CATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGG 20100 | ||| | ||| |||||||||||||| ||| |||| || | |||||||| || Sbjct 402369 TAAAGTGCGACCATCCTCCAATTGTTTGCCAGCAAAAATGAGACGTTGTTGATCTGGAGG 402310 Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160 | ||| ||||| || ||| || ||| || | ||| | ||| || || Sbjct 402309 AATGCCCTCTTTATCTTGAATCTTAGCTTTAACATTCTCAATACTATCAGATGGCTCGAC 402250 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| || ||||| |||||||| || ||||||||||| ||||| Sbjct 402249 CTCTAAGGTGATAGTTTTACCGGTCAAAGTCTTGACAAAAATCTGCAT 402202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||| | ||| ||||| || || |||||||| ||||| |||||||| || Sbjct 389383 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 389324 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | ||||||||| || || || || |||| | | |||||| || ||| Sbjct 389323 AACGTGCGACCATCTTCCAACTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGA 389264 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||| || || || || || | ||| | ||| ||||| | Sbjct 389263 ATGCCTTCTTTATCTTGGATCTTAGCCTTGACGTTTTCAATTGTATCAGATGGTTCAACT 389204 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| |||||||||||||| ||||| || ||||| ||||||||||| Sbjct 389203 TCCAATGTAATGGTTTTGCCAGTCAAAGTCTTGACGAAAATTTGCAT 389157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || |||||||| ||||| |||||||| ||||||||||| || | || | |||| Sbjct 402185 AATACCAAATGAAGTGTGGATTCTTTCTGTATGTTGTAGTCAGAGAGGGTGCGACCATCT 402126 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 ||||||||||| || || |||| | | ||||| || || | ||||||||| || Sbjct 402125 TCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGGTCTGGAGGAATGCCTTCTTTATCT 402066 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| || || | ||| | || | ||| ||||| ||||||||| Sbjct 402065 TGAATTTTGGCCTTGACGTTCTCAATCGTGTCAGATGCTTCGACTTCCAATGTAATGGTT 402006 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| ||||| ||||| || ||||| Sbjct 402005 TTGCCAGTCAAGGTTTTTACAAATATCTGCAT 401974 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||| | ||| |||||||||| |||||||| ||||| |||||||||||| Sbjct 389611 CCACCACGTAGACGCAATACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAG 389552 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| | ||||||||| ||| | || | | |||||||| || Sbjct 389551 AGAGTACGACCATCTTCAAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 389492 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||| || ||| || | ||| | || || || Sbjct 389491 ATACCTTCTTTGTCTTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCGACC 389432 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || ||||||||||| ||||| || || || || || ||||| Sbjct 389431 TCCAAAGTGATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389385 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||| | ||| ||||| || || ||||||||||| || |||||||| ||| | Sbjct 390067 CCACCACGTAGACGCAAGACCAAGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCGGAC 390008 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| | || ||||| || |||| | | ||| ||||| || Sbjct 390007 AAAGTACGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGTGGA 389948 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| ||||| || || | ||| | ||| ||||| Sbjct 389947 ATGCCTTCTTTGTCTTGGATTTTAGCCTTAACATTTTCAATTGTATCAGATGGTTCAACC 389888 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| |||||||||||||| ||||| || || || || || ||||| Sbjct 389887 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACGAAGATCTGCAT 389841 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || |||||||| ||||| ||||| || || |||||||||||| | ||| |||| Sbjct 400133 AATACCAAATGAAGTGTGGATTCCTTCTGAATGTTGTAATCGGAAAGAGTACGTCCATCT 400074 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 ||||||||||| || ||| | || | | |||||||| || | ||| |||||||| Sbjct 400073 TCCAATTGTTTACCGGCAAATATCAAACGTTGTTGATCTGGAGGAATGCCCTCTTTGTCT 400014 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| || || | ||| ||| ||||| || | ||| || ||| Sbjct 400013 TGAATTTTAGCCTTAACGTTCTCAATGCTATCAGATGGTTCGACCTCTAAGGTGATAGTT 399954 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| || || |||||||| ||||| Sbjct 399953 TTGCCTGTCAAAGTCTTTACAAAAATCTGCAT 399922 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||||||| | | ||||| |||| || ||||||||||||||||| ||||| Sbjct 399464 CCACCTCGTAAACGAAGGACCAAGTGTAAAGTGGATTCTTTTTGTATGTTATAATCAGAA 399405 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATA-AATAAGCCTCTGTTGATCGACGGG 20100 | || | |||||| | ||| || || ||| | | ||||| | |||||||| || Sbjct 399404 AGGGTGCGACCATCTTCAAGTTGCTTACCAGCAAATATTAAGCGT-TGTTGATCTGGTGG 399346 Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160 | |||||||||||| ||||||| || || | | | ||| |||||| Sbjct 399345 AATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTTCGATGCTATCAGATGGTTCCAC 399286 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| || ||||||||||| || || || || || || || |||||||| Sbjct 399285 CTCCAAAGTGATGGTTTTGCCTGTTAATGTCTTCACGAAGATCTGCATTTT 399235 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || |||||||| | |||||||| || || || ||||||||| | || | |||| Sbjct 401273 AATACCAAATGCAAAGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCT 401214 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 ||||||||||| || ||| | || | | ||||| || || | ||| |||||||| Sbjct 401213 TCCAATTGTTTACCAGCAAATATCAAACGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCT 401154 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| || || | ||| | ||| ||||| ||| | |||||||| Sbjct 401153 TGAATTTTAGCCTTGACGTTCTCAATACTATCAGATGGTTCGACTTCTAGTGTAATGGTC 401094 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||||||||| ||||| ||||| || ||||| Sbjct 401093 TTGCCGGTCAGGGTTTTAACAAATATCTGCAT 401062 >seq9966 Length=18433 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| ||||| | |||||||||||| ||||| || || ||||| |||||||| ||| Sbjct 14123 CCTCCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGAT 14182 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || |||||| | ||| ||||| || |||| | | |||||||| || Sbjct 14183 AAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 14242 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||| || || || ||||| ||||| | ||| | ||| ||| || | Sbjct 14243 ATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACT 14302 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| || || || ||||||||||| ||||| || || || |||||||| Sbjct 14303 TCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTT 14352 >SEQ18478 Length=82247 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || ||||| | |||||||||||| ||||| || || ||||| |||||||| ||| Sbjct 41412 CCACCACGTAAACGCAACACCAAATGAAGTGTCGACTCCTTTTGAATGTTGTAGTCGGAT 41471 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || |||||| | ||| ||||| || |||| | | |||||||| || Sbjct 41472 AAGGTGCGTCCATCTTCAAGTTGCTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 41531 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||| || || || ||||| ||||| | ||| | ||| ||| || | Sbjct 41532 ATGCCCTCCTTATCTTGGATTTTAGCCTTCACATTTTCAATTGTGTCGGAAGGCTCAACT 41591 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| || || || ||||||||||| ||||| || || || |||||||| Sbjct 41592 TCCAAAGTGATAGTCTTGCCGGTCAAAGTTTTAACGAATATCTGCATTTT 41641 >seq2607 Length=223464 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||| | ||||||||| || ||||| ||||| ||||| || || |||||| | Sbjct 124805 CCACCACGTAGGCGCAACACCAAGTGAAGTGTTGATTCCTTTTGAATATTATAATCGGAC 124864 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | ||||||||||||||| || ||| |||| | | || ||||| || Sbjct 124865 AATGTGCGACCATCTTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGAGGA 124924 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | || |||||||| ||| || ||| || | | | || || |||||| Sbjct 124925 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGATGGTTCCACC 124984 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || | ||| ||||| ||||| || | || || || || || |||||||| Sbjct 124985 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAATATCTGCATTTT 125034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419458630876902