Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
SEQ19233 89.7 5e-13
>SEQ19233
Length=664580
Score = 89.7 bits (98), Expect = 5e-13
Identities = 129/180 (72%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 5313 ATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGT 5372
|||| ||||||||||| | ||||| || | ||| || || || |||||||| |
Sbjct 229616 ATATACGTTCGCATATAAATTGAGCAATACGGTCACCGCGTTTTACTTCAAAGTCATCAT 229557
Query 5373 TTCCGAAG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCC 5430
| ||| || || || || || || | || || || |||||||| || | || ||
Sbjct 229556 --CAGAATGATTGAAAAGTACAACACCCAAGTTACCACGATAGTCTTCATCAACGACACC 229499
Query 5431 AGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTA 5490
|||||| ||||| ||||| | ||| || ||||| || ||||||||||||| ||||| ||
Sbjct 229498 AGCGCCAACGTCAATAAAATTTTTAACAGCAAGACCTGAACGTGGTGCTACACGTCCATA 229439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447609683243040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |