Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value SEQ19233 89.7 5e-13 >SEQ19233 Length=664580 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 5313 ATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGT 5372 |||| ||||||||||| | ||||| || | ||| || || || |||||||| | Sbjct 229616 ATATACGTTCGCATATAAATTGAGCAATACGGTCACCGCGTTTTACTTCAAAGTCATCAT 229557 Query 5373 TTCCGAAG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCC 5430 | ||| || || || || || || | || || || |||||||| || | || || Sbjct 229556 --CAGAATGATTGAAAAGTACAACACCCAAGTTACCACGATAGTCTTCATCAACGACACC 229499 Query 5431 AGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTA 5490 |||||| ||||| ||||| | ||| || ||||| || ||||||||||||| ||||| || Sbjct 229498 AGCGCCAACGTCAATAAAATTTTTAACAGCAAGACCTGAACGTGGTGCTACACGTCCATA 229439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447609683243040