Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value SEQ18352 93.3 4e-14 >SEQ18352 Length=541547 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||||||||||||||| || | | ||| | ||||||| |||||||| | || Sbjct 389119 TCCTTTTGAATGTTGTAGTCGGAGAGGGTACGCCCATCCTCCAATTGCTTACCAGCAAAA 389060 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 |||||||| || || || || | || |||||| ||| |||||| ||||| | Sbjct 389059 ATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTTATCCTGAATTTTAGCCTTGACATTT 389000 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| |||| | ||| || | || ||||||||||| || | |||||||||| Sbjct 388999 TCAATGGTGTCGGATGGCTCGACTTCCAAAGTAATGGTTTTACCAGTCAAAGTTTTCACA 388940 Query 48716 AAAATCTGCAT 48726 || || ||||| Sbjct 388939 AAGATTTGCAT 388929 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 ||| || |||||||||||| ||||| || |||||||| |||| || || | || Sbjct 390509 TAATACCAAATGAAGTGTGGATTCCTTCTGTATGTTGTAGTCAGATAAGGTACGACCATC 390450 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 |||| ||||||||| || |||| |||||||||||||| || | | || ||||| Sbjct 390449 TTCCAACTGCTTACCAGCGAAAATCAAACGCTGCTGATCTGGGGGAATGCCCTCTTTGTC 390390 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 |||||| ||||| | | || ||||| | | || || | ||| ||||| Sbjct 390389 TTGAATTTTAGCCTTGACATTTTCAATAGTATCAGATGGTTCAACTTCCAATGTAATGGT 390330 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || | ||| || ||||| |||||||| Sbjct 390329 TTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 390297 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||||||||| ||||| |||||||| ||||||| ||| || |||| || Sbjct 399674 ACCAAATGAAGTGTTGATTCCTTCTGAATGTTATAATCAGACAAAGTACGACCGTCTTCA 399615 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 || ||||| || | | ||||||||||| || || || | || ||| || || Sbjct 399614 AGTTGCTTGCCAGCAAATATTAAACGCTGTTGGTCTGGAGGAATACCTTCTTTATCTTGG 399555 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| ||| | | |||| ||||| | | || || | |||||||||||| Sbjct 399554 ATTTTGGCCTTAACATTTTCTATTGTATCAGATGCTTCAACTTCCAATGTTATGGTTTTG 399495 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || || | |||||| ||||| ||||||||| Sbjct 399494 CCAGTTAAAGTTTTAACAAAGATCTGCATC 399465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421122120997142