Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23690 140 2e-28
seq1229 140 2e-28
>SEQ23690
Length=67964
Score = 140 bits (154), Expect = 2e-28
Identities = 201/278 (72%), Gaps = 8/278 (3%)
Strand=Plus/Minus
Query 3871 AAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATAT 3930
||| ||||| |||||| | ||||| || ||||| || || ||||| ||||||||||||||
Sbjct 36350 AAATGGTGTCCATTTTGTTATGGCGGATGGTGGTTTTTCAGTTGAAGGTCAAGAAAATAT 36291
Query 3931 GCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCAT 3990
|| ||||| | || ||| | | ||| | ||||| ||||||| || |||| || |
Sbjct 36290 TCAGGAAATTCTTTCAAAACAACTTTATCTCTGTCAGTGTTTAACAGCGTTGAAAATTCT 36231
Query 3991 ACG---AATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGC 4047
| || ||| || |||||| ||||||||||||| |||| ||||| || ||||
Sbjct 36230 TTGCGAAAATGGAAGT-TTTGTGT--GCAAATTTTTCGATTTATTCACACCATTCAGTGT 36174
Query 4048 TGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTC 4107
||| || | ||||| ||||||| | |||| || ||| | ||| | |||||| | |
Sbjct 36173 TGGGCTAATATATTTAATGTATAAGTGTTTTGATGTTATATCAATTATAAAACCA-AATA 36115
Query 4108 ATCGC-GACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144
| || |||| || ||||| ||| | ||||| || |||
Sbjct 36114 GTAGCAGACCAGCTAATTCCGAACGTTATTTAGTATGT 36077
>seq1229
Length=12593
Score = 140 bits (154), Expect = 2e-28
Identities = 201/278 (72%), Gaps = 8/278 (3%)
Strand=Plus/Plus
Query 3871 AAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATAT 3930
||| ||||| |||||| | ||||| || ||||| || || ||||| ||||||||||||||
Sbjct 9592 AAATGGTGTCCATTTTGTTATGGCGGATGGTGGTTTTTCAGTTGAAGGTCAAGAAAATAT 9651
Query 3931 GCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCAT 3990
|| ||||| | || ||| | | ||| | ||||| ||||||| || |||| || |
Sbjct 9652 TCAGGAAATTCTTTCAAAACAACTTTATCTCTGTCAGTGTTTAACAGCGTTGAAAATTCT 9711
Query 3991 ACG---AATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGC 4047
| || ||| || |||||| ||||||||||||| |||| ||||| || ||||
Sbjct 9712 TTGCGAAAATGGAAGT-TTTGTGT--GCAAATTTTTCGATTTATTCACACCATTCAGTGT 9768
Query 4048 TGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTC 4107
||| || | ||||| ||||||| | |||| || ||| | ||| | |||||| | |
Sbjct 9769 TGGGCTAATATATTTAATGTATAAGTGTTTTGATGTTATATCAATTATAAAACCA-AATA 9827
Query 4108 ATCGC-GACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144
| || |||| || ||||| ||| | ||||| || |||
Sbjct 9828 GTAGCAGACCAGCTAATTCCGAACGTTATTTAGTATGT 9865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276468858964426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |