Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq7570 86.0 6e-13 SEQ21577 82.4 8e-12 SEQ20425 82.4 8e-12 seq2834 82.4 8e-12 seq2621 82.4 8e-12 SEQ10934 78.8 9e-11 seq6002 78.8 9e-11 >seq7570 Length=28267 Score = 86.0 bits (94), Expect = 6e-13 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 ||||| || | ||| ||||||||||| | ||||||||| || || || ||||| |||| Sbjct 16370 AGATATGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTTAGGTAGTAGTTCACCTGC 16311 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||| | | |||||||| ||||| | |||||||||||| || Sbjct 16310 CCATGCTTTCTGTTGGTCCAATCACTTATCCTTGGAATGAGCCTATGCGTCCATCTTCCT 16251 Query 889 TT 890 || Sbjct 16250 TT 16249 >SEQ21577 Length=24142 Score = 82.4 bits (90), Expect = 8e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 || || || | ||| ||||||||||| | ||||||||| |||||||| ||||| |||| Sbjct 20134 AGGTATGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTAAGATAGTAGTTCACCTGT 20193 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||||| | ||| |||| ||||| ||| |||||||| || Sbjct 20194 CCATGCTTTCTGTTAGTCCAAACACTTATCTTTGGAATGAGCTTATGTGTCCATCTTCCT 20253 Query 889 TTC 891 ||| Sbjct 20254 TTC 20256 >SEQ20425 Length=109086 Score = 82.4 bits (90), Expect = 8e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 ||||| || | ||| ||||||||||| | ||||||||| |||||||| ||||| |||| Sbjct 20153 AGATATGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTAAGATAGTAGTTCACCTGT 20094 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||| | | ||| |||| ||||| ||| |||||||| || Sbjct 20093 CCATGCTTTCTGTTGGTCCAATCACTTATCTTTGGAATGAGCTTATGTGTCCATCTTCCT 20034 Query 889 TTC 891 ||| Sbjct 20033 TTC 20031 >seq2834 Length=21577 Score = 82.4 bits (90), Expect = 8e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 || ||||| | ||| ||||||||||| | ||||||||| |||||||| ||||| |||| Sbjct 5267 AGGTACGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTAAGATAGTAGTTCACCTGT 5326 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||| | | ||| |||| ||||| ||| |||||||| || Sbjct 5327 CCATGCTTTCTGTTGGTCCAATCACTTATCTTTGGAATGAGCTTATGTGTCCATCTTCCT 5386 Query 889 TTC 891 ||| Sbjct 5387 TTC 5389 >seq2621 Length=13790 Score = 82.4 bits (90), Expect = 8e-12 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 || ||||| | ||| ||||||||||| | ||||||||| |||||||| ||||| |||| Sbjct 1069 AGGTACGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTAAGATAGTAGTTCACCTGT 1128 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||| | | ||| |||| ||||| ||| |||||||| || Sbjct 1129 CCATGCTTTCTGTTGGTCCAATCACTTATCTTTGGAATGAGCTTATGTGTCCATCTTCCT 1188 Query 889 TTC 891 ||| Sbjct 1189 TTC 1191 >SEQ10934 Length=20051 Score = 78.8 bits (86), Expect = 9e-11 Identities = 91/123 (74%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 || || || | ||| ||||||||||| | ||||||||| |||||||| ||||| |||| Sbjct 11287 AGGTATGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTAAGATAGTAGTTCACCTGT 11346 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||| | | ||| |||| ||||| ||| |||||||| || Sbjct 11347 CCATGCTTTCTGTTGGTCCAATCACTTATCTTTGGAATGAGCTTATGTGTCCATCTTCCT 11406 Query 889 TTC 891 ||| Sbjct 11407 TTC 11409 >seq6002 Length=33054 Score = 78.8 bits (86), Expect = 9e-11 Identities = 91/123 (74%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 769 AGATACGCCCGGAAACAGCCGTGTCCTGATAACATCTGTGTAAGATAATAGTTGACCTCA 828 || ||||| | ||| ||||||||||| | ||||||||| |||||| | ||||| |||| Sbjct 624 AGGTACGCTCTGAAGCAGCCGTGTCCAGTTAACATCTGGGTAAGAAAGTAGTTCACCTGT 683 Query 829 CCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGTATGAGACGATGCGTCCATCTACCA 888 || || | | ||| |||| | | ||| |||| ||||| ||| |||||||| || Sbjct 684 CCATGCTTTCTGTTGGTCCAATCACTTATCTTTGGAATGAGCTTATGTGTCCATCTTCCT 743 Query 889 TTC 891 ||| Sbjct 744 TTC 746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50935588495812