Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_006657.1
Length=19820
Score E
Sequences producing significant alignments: (Bits) Value
SEQ23955 86.0 8e-13
SEQ21888 84.2 3e-12
SEQ19664 84.2 3e-12
SEQ23690 80.6 3e-11
>SEQ23955
Length=67973
Score = 86.0 bits (94), Expect = 8e-13
Identities = 174/250 (70%), Gaps = 10/250 (4%)
Strand=Plus/Plus
Query 12401 AACCATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAA-ACGGATTTGAT 12459
|||||| ||| | ||||||| ||| |||||| | ||| || || || | | |||| |
Sbjct 66859 AACCATACTTCAACATACACTTTAGTAATAAATATACATATATCGCAAGAAGCATTTTCT 66918
Query 12460 TAATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGC 12519
| | | | | || ||| | ||| | |||||||||||||||||| | || |||||
Sbjct 66919 TCGTCTGTATATAAGTT-GAACTCTTTCCTAAATAAAAATATTTTTATTGCATGCATGGC 66977
Query 12520 TTTTGCCATCCACCTAGCGTGGTGGAATGCACCC-GGTTTTCGAAATTTTACTTAACTGC 12578
||| |||||||| || ||||| | |||| ||| || |||||| || || ||||
Sbjct 66978 TTTCGCCATCCATCTTGCGTGAT-GAATAATCCCAGGAGATCGAAACTT---TTTGCTGC 67033
Query 12579 AG-GGAACTTT--ACCAATAAATATCTGAACAAGCTCCAAAAGTTCCCGGTAGTCTTCCC 12635
|| |||||| || | |||||| ||||| |||| ||||| | || || || |
Sbjct 67034 AGTTCAACTTTTCTCCTAAAAATATTAATACAAGTTCCATAAGTTACTTATAATCATCTC 67093
Query 12636 TTGGTTGATT 12645
||||||| ||
Sbjct 67094 TTGGTTGGTT 67103
>SEQ21888
Length=36847
Score = 84.2 bits (92), Expect = 3e-12
Identities = 126/176 (72%), Gaps = 10/176 (6%)
Strand=Plus/Minus
Query 12475 TTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCCATCCACCT 12534
|||||| | ||| | ||||||||||||||||| | || |||||||| |||||||| ||
Sbjct 10229 TTTGAACTCTTTCCTAAATAAAAATATTTTTAATGCATTCATGGCTTTCGCCATCCATCT 10170
Query 12535 AGCGTGGTGGAATGCACCCGGTTTTCGAAATTTTACTTAACTGCAG---GGAACTTTACC 12591
||||| || | | || | | |||||| |||| |||||| || |||| |
Sbjct 10169 TGCGTGATGTATAGTCCCAAGATCTCGAAACTTTA---TGCTGCAGTTCGG--CTTTTCT 10115
Query 12592 AATAAATATCTGAA--CAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTTGGTTGATT 12645
|| |||| | || |||| |||| |||||||| || || || ||| |||||||
Sbjct 10114 CCTATATATATTAATGCAAGTTCCAGAAGTTCCCCATAATCATCTCTTTGTTGATT 10059
>SEQ19664
Length=51834
Score = 84.2 bits (92), Expect = 3e-12
Identities = 169/248 (68%), Gaps = 6/248 (2%)
Strand=Plus/Minus
Query 12401 AACCATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAAACGGATTTGATT 12460
||||| ||| | ||||||| ||| |||||| | ||| || || | | | ||| |
Sbjct 37410 AACCAAACTTCAACATACACTTTAGTAATAAATATACATATATCGTATAGAGCTTTTTTC 37351
Query 12461 AATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCT 12520
|| | | || ||| || | ||| ||||||||||||||||| | ||||||||||
Sbjct 37350 TCTTCTGCAGACAATTTCAACTCTTTCTTAAATAAAAATATTTTTAATGCATATATGGCT 37291
Query 12521 TTTGCCATCCACCTAGCGTGGTGGAATGCACCCGGTTTTCGAAATTTTACTTAACTGCAG 12580
||||||||||| || |||| || | || || | |||||| |||| ||||| |
Sbjct 37290 TTTGCCATCCATCTTACGTGATGTATAGCCCCAGAAGATCGAAAATTTA---TACTGCTG 37234
Query 12581 -GGAACTTTACCAATAAATATCTGAA--CAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTT 12637
| | ||| | |||| || || |||| |||| ||||||| || || || |||
Sbjct 37233 TGTAGTTTTTCTGCTAAAAATGATAATGCAAGTTCCAGAAGTTCCTTATAATCATCTCTT 37174
Query 12638 GGTTGATT 12645
||||| ||
Sbjct 37173 GGTTGGTT 37166
>SEQ23690
Length=67964
Score = 80.6 bits (88), Expect = 3e-11
Identities = 124/175 (71%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 12473 ATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCCATCCAC 12532
|||||||| | ||| | ||||||||||||||||| || |||||||| ||||||||
Sbjct 46070 ATTTTGAACTCTTTCCTAAATAAAAATATTTTTAATACATGCATGGCTTTCGCCATCCAT 46011
Query 12533 CTAGCGTGGTGGAATGCACCCGGTTTTCGAAATTTTACTTAACTGCAGGGAACTTTACCA 12592
|| || || || | || || || |||||| |||| | || | || |||| |
Sbjct 46010 CTTGCATGATGTATAGCTCCAGGAGGTCGAAACTTTATTGTACAGTTCGG--CTTTTCTC 45953
Query 12593 ATAAATATCTGAA--CAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTTGGTTGATT 12645
|||| | | || |||| |||| |||||||| || || || |||||||| ||
Sbjct 45952 TTAAAAACATTAATGCAAGTTCCAGAAGTTCCCTATAATCATCTCTTGGTTGGTT 45898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 63287196785118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |