Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value SEQ23955 86.0 8e-13 SEQ21888 84.2 3e-12 SEQ19664 84.2 3e-12 SEQ23690 80.6 3e-11 >SEQ23955 Length=67973 Score = 86.0 bits (94), Expect = 8e-13 Identities = 174/250 (70%), Gaps = 10/250 (4%) Strand=Plus/Plus Query 12401 AACCATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAA-ACGGATTTGAT 12459 |||||| ||| | ||||||| ||| |||||| | ||| || || || | | |||| | Sbjct 66859 AACCATACTTCAACATACACTTTAGTAATAAATATACATATATCGCAAGAAGCATTTTCT 66918 Query 12460 TAATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGC 12519 | | | | | || ||| | ||| | |||||||||||||||||| | || ||||| Sbjct 66919 TCGTCTGTATATAAGTT-GAACTCTTTCCTAAATAAAAATATTTTTATTGCATGCATGGC 66977 Query 12520 TTTTGCCATCCACCTAGCGTGGTGGAATGCACCC-GGTTTTCGAAATTTTACTTAACTGC 12578 ||| |||||||| || ||||| | |||| ||| || |||||| || || |||| Sbjct 66978 TTTCGCCATCCATCTTGCGTGAT-GAATAATCCCAGGAGATCGAAACTT---TTTGCTGC 67033 Query 12579 AG-GGAACTTT--ACCAATAAATATCTGAACAAGCTCCAAAAGTTCCCGGTAGTCTTCCC 12635 || |||||| || | |||||| ||||| |||| ||||| | || || || | Sbjct 67034 AGTTCAACTTTTCTCCTAAAAATATTAATACAAGTTCCATAAGTTACTTATAATCATCTC 67093 Query 12636 TTGGTTGATT 12645 ||||||| || Sbjct 67094 TTGGTTGGTT 67103 >SEQ21888 Length=36847 Score = 84.2 bits (92), Expect = 3e-12 Identities = 126/176 (72%), Gaps = 10/176 (6%) Strand=Plus/Minus Query 12475 TTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCCATCCACCT 12534 |||||| | ||| | ||||||||||||||||| | || |||||||| |||||||| || Sbjct 10229 TTTGAACTCTTTCCTAAATAAAAATATTTTTAATGCATTCATGGCTTTCGCCATCCATCT 10170 Query 12535 AGCGTGGTGGAATGCACCCGGTTTTCGAAATTTTACTTAACTGCAG---GGAACTTTACC 12591 ||||| || | | || | | |||||| |||| |||||| || |||| | Sbjct 10169 TGCGTGATGTATAGTCCCAAGATCTCGAAACTTTA---TGCTGCAGTTCGG--CTTTTCT 10115 Query 12592 AATAAATATCTGAA--CAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTTGGTTGATT 12645 || |||| | || |||| |||| |||||||| || || || ||| ||||||| Sbjct 10114 CCTATATATATTAATGCAAGTTCCAGAAGTTCCCCATAATCATCTCTTTGTTGATT 10059 >SEQ19664 Length=51834 Score = 84.2 bits (92), Expect = 3e-12 Identities = 169/248 (68%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 12401 AACCATGCTTTGATATACACTGTAGCAATAAAAACACAAATTTCAGAAACGGATTTGATT 12460 ||||| ||| | ||||||| ||| |||||| | ||| || || | | | ||| | Sbjct 37410 AACCAAACTTCAACATACACTTTAGTAATAAATATACATATATCGTATAGAGCTTTTTTC 37351 Query 12461 AATTTCACCGTCATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCT 12520 || | | || ||| || | ||| ||||||||||||||||| | |||||||||| Sbjct 37350 TCTTCTGCAGACAATTTCAACTCTTTCTTAAATAAAAATATTTTTAATGCATATATGGCT 37291 Query 12521 TTTGCCATCCACCTAGCGTGGTGGAATGCACCCGGTTTTCGAAATTTTACTTAACTGCAG 12580 ||||||||||| || |||| || | || || | |||||| |||| ||||| | Sbjct 37290 TTTGCCATCCATCTTACGTGATGTATAGCCCCAGAAGATCGAAAATTTA---TACTGCTG 37234 Query 12581 -GGAACTTTACCAATAAATATCTGAA--CAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTT 12637 | | ||| | |||| || || |||| |||| ||||||| || || || ||| Sbjct 37233 TGTAGTTTTTCTGCTAAAAATGATAATGCAAGTTCCAGAAGTTCCTTATAATCATCTCTT 37174 Query 12638 GGTTGATT 12645 ||||| || Sbjct 37173 GGTTGGTT 37166 >SEQ23690 Length=67964 Score = 80.6 bits (88), Expect = 3e-11 Identities = 124/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 12473 ATTTTGAATTGTTTACGAAATAAAAATATTTTTATAGTATATATGGCTTTTGCCATCCAC 12532 |||||||| | ||| | ||||||||||||||||| || |||||||| |||||||| Sbjct 46070 ATTTTGAACTCTTTCCTAAATAAAAATATTTTTAATACATGCATGGCTTTCGCCATCCAT 46011 Query 12533 CTAGCGTGGTGGAATGCACCCGGTTTTCGAAATTTTACTTAACTGCAGGGAACTTTACCA 12592 || || || || | || || || |||||| |||| | || | || |||| | Sbjct 46010 CTTGCATGATGTATAGCTCCAGGAGGTCGAAACTTTATTGTACAGTTCGG--CTTTTCTC 45953 Query 12593 ATAAATATCTGAA--CAAGCTCCAAAAGTTCCCGGTAGTCTTCCCTTGGTTGATT 12645 |||| | | || |||| |||| |||||||| || || || |||||||| || Sbjct 45952 TTAAAAACATTAATGCAAGTTCCAGAAGTTCCCTATAATCATCTCTTGGTTGGTT 45898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63287196785118