Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value SEQ18582 89.7 8e-13 >SEQ18582 Length=549080 Score = 89.7 bits (98), Expect = 8e-13 Identities = 174/252 (69%), Gaps = 10/252 (4%) Strand=Plus/Minus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 |||||| | || ||||| || || || || | || |||| || |||||||| ||||| Sbjct 424884 TGGTATATTATTTAATCATGAGTCACCGAGGCGTGGAGAGAATTTCGTAACTCGCAAGAT 424825 Query 194006 TACACAAGGTTTATCT---AAGATCTCTGTTGGATTACA--GAAGATTCTTTATCTTGGT 194060 |||| ||| | | || || | | | || | | ||| ||| | || | ||| Sbjct 424824 AACAC---GTTCAGTTGCAAAAATATTTCTAA-ATCAAATGGAATATTTTGAAT-TGGGT 424770 Query 194061 AATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTA 194120 ||| | || |||| | ||||||||||| || | |||||||| ||||| |||||| | Sbjct 424769 AATTTGGATTCTAAACGTGATTGGGGACATGCCATCGATTATGTGGAAGCTATGTGGACA 424710 Query 194121 ATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAACAGTATTCTGTT 194180 |||||||| | |||| ||| ||||||||| ||||| || || ||| | || ||| Sbjct 424709 ATGTTGCAGCGGGATACACCATCTGATTATGTTATTGCAACTGGAGAAACGCATAGTGTA 424650 Query 194181 AGAGACTTTGTG 194192 | || |||||| Sbjct 424649 CGTGAATTTGTG 424638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807301405589520