Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28] 25,142 sequences; 621,706,043 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value SEQ20258 131 2e-25 seq3264 131 2e-25 SEQ18352 129 6e-25 SEQ20260 125 7e-24 >SEQ20258 Length=134083 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701 |||| ||||||| |||| ||||| || ||||||||||| ||||||| |||| ||| Sbjct 132245 TATACTTTATTGGAATTTGAGCAGGCTCGTACGCATGATGACTTATGGAACTCTGCACAG 132304 Query 71702 CGACAGCTACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAG 71761 ||| || |||||| || ||||| ||||| | ||||| ||||| ||||| ||||| Sbjct 132305 TTACAATTAATCAATGAAGGCAAAATGCACGGTTTTCTACGAATGTATTGGGCTAAAAAA 132364 Query 71762 ATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGAT 71821 || || || ||||| ||||||| || || || || || | | || | | ||||| Sbjct 132365 ATACTTGAATGGACAGAAACTCCTGAACAAGCCCTGGAATTCGCAATATTGTTGAACGAC 132424 Query 71822 AGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863 | ||| ||||| || || ||||| || || || ||||| ||| Sbjct 132425 AAATATAGTCTAGATGGACGCGACCCCAATGGCTATGTTGGT 132466 >seq3264 Length=23417 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701 |||| ||||||| |||| ||||| || ||||||||||| ||||||| |||| ||| Sbjct 18761 TATACTTTATTGGAATTTGAGCAGGCTCGTACGCATGATGACTTATGGAACTCTGCACAG 18702 Query 71702 CGACAGCTACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAG 71761 ||| || |||||| || ||||| ||||| | ||||| ||||| ||||| ||||| Sbjct 18701 TTACAATTAATCAATGAAGGCAAAATGCACGGTTTTCTACGAATGTATTGGGCTAAAAAA 18642 Query 71762 ATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGAT 71821 || || || ||||| ||||||| || || || || || | | || | | ||||| Sbjct 18641 ATACTTGAATGGACAGAAACTCCTGAACAAGCCCTGGAATTCGCAATATTGTTGAACGAC 18582 Query 71822 AGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863 | ||| ||||| || || ||||| || || || ||||| ||| Sbjct 18581 AAATATAGTCTAGATGGACGCGACCCCAATGGCTATGTTGGT 18540 >SEQ18352 Length=541547 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| || ||||||||| | ||||| | ||| ||||||| Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| || ||| ||||||||||| ||||| || |||||| Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | ||||||||||| ||||||| | | | || |||||| ||| Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||||| || ||||||||| | ||| |||| Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGT 399902 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || ||||| || || ||||| ||| | ||||| | || | || || Sbjct 389385 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 389444 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| |||||| ||||||||||| || ||||| |||||| Sbjct 389445 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 389504 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | | ||||||||||| ||||||| | | | || ||| || ||| Sbjct 389505 CAACGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 389564 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || ||||| ||||||||| | ||| |||| Sbjct 389565 ATCCAAAAGGAATCTACTTTACATTTGGT 389593 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||||||||| || ||||| ||| | || || | ||| | ||| || Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | ||||| || ||| || |||||||| || ||||| || ||| Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| || || |||||| | ||||||| | | | | || ||||| ||| Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 402153 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || || |||||||| || | ||| |||| Sbjct 402154 ATACAGAAAGAATCCACACTTCATTTGGT 402182 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || ||||| || || ||||| ||| | ||||| | || | || || Sbjct 390525 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 390584 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| |||||| ||||||||||| || ||||| |||||| Sbjct 390585 GACACTATTGAAAATGTGAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 390644 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | | ||||||||||| ||||||| | | | || ||| || ||| Sbjct 390645 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 390704 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || ||||| ||||||||| | ||| |||| Sbjct 390705 ATCCAAAAGGAATCTACTTTACATTTGGT 390733 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| ||| | || || | || | || || Sbjct 389613 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 389672 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| ||||| ||||||||||| || ||||| |||||| Sbjct 389673 GACACCATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 389732 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | |||| || ||||| || || ||||||| | | | | | ||||| ||| Sbjct 389733 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCTTATCTGACTACAAC 389792 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || ||||| || |||||| |||| ||||| || Sbjct 389793 ATCCAAAAGGAGTCTACTCTCCACTTGGTCTTG 389825 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| ||| | || || | || | || || Sbjct 390981 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 391040 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | |||||| ||||| ||||||||||| || ||||| |||||| Sbjct 391041 GACACCATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 391100 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | |||| || ||||| || || ||||||| | | | | | ||||| ||| Sbjct 391101 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCTTATCTGACTACAAC 391160 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || ||||| || |||||| |||| ||||| || Sbjct 391161 ATCCAAAAGGAGTCTACTCTCCACTTGGTCTTG 391193 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | || || || |||||||| || ||| | ||||| | || | ||| | Sbjct 399234 CAAAATGCAGATCTTCGTGAAGACATTAACAGGCAAAACCATCACTTTGGAGGTGGAACC 399293 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | || | |||||| | || || ||| ||| ||||||||||| || || || || Sbjct 399294 ATCTGATAGCATCGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCACCAGA 399353 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||||||| | | || | | || || ||||| ||||||| | | | | | || || Sbjct 399354 TCAACAACGCTTAATATTTGCTGGTAAGCAACTTGAAGATGGTCGCACCCTTTCTGATTA 399413 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||| ||||||||||| ||| | || ||||||| Sbjct 399414 TAACATACAAAAAGAATCCACTTTACACTTGGTCCT 399449 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| |||||| | ||||| ||||| || ||||| ||| | || || | ||| | || | Sbjct 388925 CAACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAGCC 388984 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | ||||||||| || | ||||| || ||| || || ||||| || || || || Sbjct 388985 ATCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCAGA 389044 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 |||||| | | |||| | || || ||| | || |||| | | | || |||||| Sbjct 389045 CCAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGACTA 389104 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||||||||| ||||| ||| |||| ||||| || Sbjct 389105 CAACATTCAAAAGGAATCAACTCTCCACTTGGTCTTG 389141 >SEQ20260 Length=19963 Score = 125 bits (138), Expect = 7e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701 |||| ||||| | |||| ||||| || ||||||||||| ||||||| |||| ||| Sbjct 2087 TATACTTTATCGGAATTTGAGCAGGCTCGTACGCATGATGACTTATGGAACTCTGCACAG 2146 Query 71702 CGACAGCTACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAG 71761 ||| || |||||| || ||||| ||||| | ||||| ||||| ||||| ||||| Sbjct 2147 TTACAATTAATCAATGAAGGCAAAATGCACGGTTTTCTACGGATGTATTGGGCTAAAAAA 2206 Query 71762 ATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGAT 71821 || || || ||||| ||||||| || || || || || | | || | | ||||| Sbjct 2207 ATACTTGAATGGACAGAAACTCCTGAACAAGCCCTGGAATTCGCAATATTGTTGAACGAC 2266 Query 71822 AGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863 | ||| ||||| || || ||||| || || || ||||| ||| Sbjct 2267 AAATATAGTCTAGATGGACGCGACCCCAATGGCTATGTTGGT 2308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478511968374240