Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
SEQ20258 131 2e-25
seq3264 131 2e-25
SEQ18352 129 6e-25
SEQ20260 125 7e-24
>SEQ20258
Length=134083
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701
|||| ||||||| |||| ||||| || ||||||||||| ||||||| |||| |||
Sbjct 132245 TATACTTTATTGGAATTTGAGCAGGCTCGTACGCATGATGACTTATGGAACTCTGCACAG 132304
Query 71702 CGACAGCTACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAG 71761
||| || |||||| || ||||| ||||| | ||||| ||||| ||||| |||||
Sbjct 132305 TTACAATTAATCAATGAAGGCAAAATGCACGGTTTTCTACGAATGTATTGGGCTAAAAAA 132364
Query 71762 ATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGAT 71821
|| || || ||||| ||||||| || || || || || | | || | | |||||
Sbjct 132365 ATACTTGAATGGACAGAAACTCCTGAACAAGCCCTGGAATTCGCAATATTGTTGAACGAC 132424
Query 71822 AGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863
| ||| ||||| || || ||||| || || || ||||| |||
Sbjct 132425 AAATATAGTCTAGATGGACGCGACCCCAATGGCTATGTTGGT 132466
>seq3264
Length=23417
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701
|||| ||||||| |||| ||||| || ||||||||||| ||||||| |||| |||
Sbjct 18761 TATACTTTATTGGAATTTGAGCAGGCTCGTACGCATGATGACTTATGGAACTCTGCACAG 18702
Query 71702 CGACAGCTACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAG 71761
||| || |||||| || ||||| ||||| | ||||| ||||| ||||| |||||
Sbjct 18701 TTACAATTAATCAATGAAGGCAAAATGCACGGTTTTCTACGAATGTATTGGGCTAAAAAA 18642
Query 71762 ATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGAT 71821
|| || || ||||| ||||||| || || || || || | | || | | |||||
Sbjct 18641 ATACTTGAATGGACAGAAACTCCTGAACAAGCCCTGGAATTCGCAATATTGTTGAACGAC 18582
Query 71822 AGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863
| ||| ||||| || || ||||| || || || ||||| |||
Sbjct 18581 AAATATAGTCTAGATGGACGCGACCCCAATGGCTATGTTGGT 18540
>SEQ18352
Length=541547
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| || ||||||||| | ||||| | ||| |||||||
Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | || ||| || ||| ||||||||||| ||||| || ||||||
Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | || || | | ||||||||||| ||||||| | | | || |||||| |||
Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
||||| || ||||||||| | ||| ||||
Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGT 399902
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || ||||| || || ||||| ||| | ||||| | || | || ||
Sbjct 389385 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 389444
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| |||||| ||||||||||| || ||||| ||||||
Sbjct 389445 GACACCATTGAAAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 389504
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | || | | ||||||||||| ||||||| | | | || ||| || |||
Sbjct 389505 CAACGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 389564
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
|| ||||| ||||||||| | ||| ||||
Sbjct 389565 ATCCAAAAGGAATCTACTTTACATTTGGT 389593
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||||||||| || ||||| ||| | || || | ||| | ||| ||
Sbjct 401974 ATGCAGATATTTGTAAAAACCTTGACTGGCAAAACCATTACATTGGAAGTCGAAGCATCT 402033
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || ||| | ||||| || ||| || |||||||| || ||||| || |||
Sbjct 402034 GACACGATTGAGAACGTCAAGGCCAAAATTCAAGATAAAGAAGGCATTCCTCCAGACCAA 402093
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| || || |||||| | ||||||| | | | | || ||||| |||
Sbjct 402094 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGCACCCTCTCTGACTACAAC 402153
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
|| || |||||||| || | ||| ||||
Sbjct 402154 ATACAGAAAGAATCCACACTTCATTTGGT 402182
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || ||||| || || ||||| ||| | ||||| | || | || ||
Sbjct 390525 ATGCAGATCTTCGTAAAGACCTTGACTGGCAAAACCATCACTTTGGAGGTCGAGCCATCT 390584
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | || ||| |||||| ||||||||||| || ||||| ||||||
Sbjct 390585 GACACTATTGAAAATGTGAAAGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 390644
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | || | | ||||||||||| ||||||| | | | || ||| || |||
Sbjct 390645 CAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGATTACAAC 390704
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
|| ||||| ||||||||| | ||| ||||
Sbjct 390705 ATCCAAAAGGAATCTACTTTACATTTGGT 390733
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| ||| | || || | || | || ||
Sbjct 389613 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 389672
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| ||||| ||||||||||| || ||||| ||||||
Sbjct 389673 GACACCATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 389732
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | |||| || ||||| || || ||||||| | | | | | ||||| |||
Sbjct 389733 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCTTATCTGACTACAAC 389792
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
|| ||||| || |||||| |||| ||||| ||
Sbjct 389793 ATCCAAAAGGAGTCTACTCTCCACTTGGTCTTG 389825
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| ||| | || || | || | || ||
Sbjct 390981 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAGCCATCT 391040
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| ||||| ||||||||||| || ||||| ||||||
Sbjct 391041 GACACCATTGAAAATGTCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 391100
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | |||| || ||||| || || ||||||| | | | | | ||||| |||
Sbjct 391101 CAGCGTTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACCTTATCTGACTACAAC 391160
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
|| ||||| || |||||| |||| ||||| ||
Sbjct 391161 ATCCAAAAGGAGTCTACTCTCCACTTGGTCTTG 391193
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||||||||| | || || || |||||||| || ||| | ||||| | || | ||| |
Sbjct 399234 CAAAATGCAGATCTTCGTGAAGACATTAACAGGCAAAACCATCACTTTGGAGGTGGAACC 399293
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| || | |||||| | || || ||| ||| ||||||||||| || || || ||
Sbjct 399294 ATCTGATAGCATCGAAAATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCACCAGA 399353
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||||||| | | || | | || || ||||| ||||||| | | | | | || ||
Sbjct 399354 TCAACAACGCTTAATATTTGCTGGTAAGCAACTTGAAGATGGTCGCACCCTTTCTGATTA 399413
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||| ||||||||||| ||| | || |||||||
Sbjct 399414 TAACATACAAAAAGAATCCACTTTACACTTGGTCCT 399449
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| |||||| | ||||| ||||| || ||||| ||| | || || | ||| | || |
Sbjct 388925 CAACATGCAAATCTTTGTGAAAACTTTGACTGGTAAAACCATTACTTTGGAAGTCGAGCC 388984
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| ||||||||| || | ||||| || ||| || || ||||| || || || ||
Sbjct 388985 ATCCGACACCATTGAAAATGTCAAGGCTAAAATTCAGGATAAGGAAGGTATTCCACCAGA 389044
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|||||| | | |||| | || || ||| | || |||| | | | || ||||||
Sbjct 389045 CCAACAACGTTTAATTTTTGCTGGTAAGCAATTGGAGGATGGGCGTACCCTCTCCGACTA 389104
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
||||||||||| ||||| ||| |||| ||||| ||
Sbjct 389105 CAACATTCAAAAGGAATCAACTCTCCACTTGGTCTTG 389141
>SEQ20260
Length=19963
Score = 125 bits (138), Expect = 7e-24
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 71642 TATAGTTTATTGCAATTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAG 71701
|||| ||||| | |||| ||||| || ||||||||||| ||||||| |||| |||
Sbjct 2087 TATACTTTATCGGAATTTGAGCAGGCTCGTACGCATGATGACTTATGGAACTCTGCACAG 2146
Query 71702 CGACAGCTACGCAATGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAG 71761
||| || |||||| || ||||| ||||| | ||||| ||||| ||||| |||||
Sbjct 2147 TTACAATTAATCAATGAAGGCAAAATGCACGGTTTTCTACGGATGTATTGGGCTAAAAAA 2206
Query 71762 ATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGAT 71821
|| || || ||||| ||||||| || || || || || | | || | | |||||
Sbjct 2207 ATACTTGAATGGACAGAAACTCCTGAACAAGCCCTGGAATTCGCAATATTGTTGAACGAC 2266
Query 71822 AGATACAGTCTCGACGGTCGCGATCCTAACGGTTATGTCGGT 71863
| ||| ||||| || || ||||| || || || ||||| |||
Sbjct 2267 AAATATAGTCTAGATGGACGCGACCCCAATGGCTATGTTGGT 2308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478511968374240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |