Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
SEQ24359 172 1e-37
SEQ19298 168 2e-36
SEQ19926 158 3e-33
SEQ18813 86.0 2e-11
>SEQ24359
Length=906208
Score = 172 bits (190), Expect = 1e-37
Identities = 597/921 (65%), Gaps = 8/921 (1%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449
|| |||| ||| ||| | || ||| || || |||| | | ||||| | |||| ||
Sbjct 359805 TTTGGATTTAAAACGTTAGAACGATCGTATCT-TCTCAAAATAAATGGGAAAGTTGTGGA 359747
Query 363450 ACGCCCGCAGCATATGTTAATGCG-TGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508
| | || || || |||| ||| | || | | |||||||| ||| | ||| | || |
Sbjct 359746 AAGACCCCAACACCTGTTGATGAGATGCT-CGATTGGTATACATGGAAATGATATAGAAG 359688
Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACA 363567
|| |||||||| ||||| ||||| | || ||| || ||||| || |||||||
Sbjct 359687 GAGCAATTGAAACTTATAATCTTCTCTCCGAGCG-GTACTTTACGCATGCATCGCCAACT 359629
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
||| |||| ||| | | ||||| | || || || || || || | |||
Sbjct 359628 CTGTTTTCCGCTGCCACTAGAAGACCACAACTTTCATCGTGTTTCCTGCTTACTATGGTT 359569
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
|| || ||||| |||||||| || | || || | | |||||| || || ||
Sbjct 359568 GATGACTCCATTGAGGGTATTTTCAAGTCAGTTGAACAATGTGCTAAGATATCGAAATCA 359509
Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGC 363747
|| || || ||||| || || || | |||| || | || || || |||
Sbjct 359508 GCTGGAGGCATTGGATTAAATATTCATTGTATTCGAGCTAAAGGCACTTTTATAACCGGA 359449
Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807
||| || || ||||| | || || ||| | || ||| ||||| || ||
Sbjct 359448 ACAAATGGTGTTTCAAATGGATTAGTACCAATGTTAAAAGTTTTTAACAATGTGGCAAGA 359389
Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867
|| || ||||| || || || || | || || ||||| || || || || |||
Sbjct 359388 TATGTTGACCAAGGCGGTGGTAAAAGGCCTGGAGCTTTTGCCATTTACCTAGAACCTTGG 359329
Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927
||| ||||||| ||||| ||| | || || |||||||| || ||||| ||| ||
Sbjct 359328 CATCCCGATATATTTGACTTTTTAGATCTTAAAAAAAACACTGGTAAAGAAGAAAACCGA 359269
Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA 363987
|| || ||| | || |||||||| ||| || |||| |||||||| || || || ||
Sbjct 359268 GCTCGAGATTTATTTTATGCACTCTGGATTCCTGATTTATTTATGAAACGTGTTGAAGCT 359209
Query 363988 GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC-GATGTATGGGG 364046
| | |||||||| || | || || | ||||||| || ||| | || || |||||
Sbjct 359208 AATGAAAATTGGTCTCTAATGTGTCCTAATAAATGTCCCGG-CTTGCATGAAGTTTGGGG 359150
Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAAT 364106
| | || | | | |||| ||| |||||| || || || || ||| |||||
Sbjct 359149 TAAAGAGTTCGAAGACTTATATACAAAATATGAAAATGAAGGTAAAGCAAATAAAACAAT 359090
Query 364107 TCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTA 364166
|| || || ||||||||||| |||| | || ||||| || || || || ||
Sbjct 359089 CAAAGCCCAAGCACTTTGGTTTGCCATAGTGGAAGCACAAATTGAAACTGGGACTCCATA 359030
Query 364167 TATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCA 364226
|||| | || ||||| || ||||| ||||| || || || | | || || ||| |
Sbjct 359029 TATGCTATATAAAGACTCTTGCAATCGCAAAAGTAATCAACAAAATTTGGGAACTATTAA 358970
Query 364227 GCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATG 364286
| || || |||| || || || |||||||| | ||||| || || |||||| ||
Sbjct 358969 GTGCAGTAATTTATGCACAGAAATAATTGAATATTCTGCTCCAGATGAAGTTGCCGTTTG 358910
Query 364287 TAACCTTGCGTCGATCGCGCT 364307
||| | ||||| || || ||
Sbjct 358909 CAACTTGGCGTCTATAGCACT 358889
>SEQ19298
Length=518036
Score = 168 bits (186), Expect = 2e-36
Identities = 601/925 (65%), Gaps = 16/925 (2%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGA 363449
|| |||| ||| ||| | || ||| || || |||| || ||||| | |||| ||
Sbjct 236304 TTTGGATTTAAAACGTTAGAACGATCGTATCT-TCTCAAGATAAATGGGAAAGTTGTGGA 236246
Query 363450 ACGCCCGCAGCATATGTTAATGCG-TGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508
| | || ||||| |||| ||| | || | | |||||||| ||| | ||| | || |
Sbjct 236245 AAGACCCCAGCACCTGTTGATGAGATGCT-CAATTGGTATACATGGGAATGATATAGAAG 236187
Query 363509 CCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACA 363567
|| |||||||| ||||| ||||| || || ||| || ||||| ||| |||||||
Sbjct 236186 GAGCAATTGAAACTTATAATCTTCTCTCTGAACG-GTACTTTACGCATGCCTCGCCAACT 236128
Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627
||| | |||| ||| | | ||||| | || || || || || || | |||
Sbjct 236127 CTGTTCTCCGCTGCCACTAGAAGGCCACAACTTTCATCGTGTTTCCTGCTTACTATGGTT 236068
Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687
| || || || || || || || | || || | | |||||| | || || ||
Sbjct 236067 GCTGACTCAATTGAAGGAATTTTCAAGTCAGTTGAACAATGTGCTATGATATCAAAATCA 236008
Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGCACA--GAACAGTTACATTCG 363743
|| || || ||||| || || || || || | || | | || ||| || |
Sbjct 236007 GCCGGTGGCATTGGATTAA--ATGTTCATTGCATTAGAGCTAAAGGCACGTTTATATCAG 235950
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
|| | || | | || ||||| | || || ||| | | || ||| | ||| ||
Sbjct 235949 GAACAAATGGTGTT--TCAAATGGATTAGTGCCAATGTTAAGGGTATTTAATAATGTGGC 235892
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
|| || || ||||| ||||| || || | || || ||||| || ||||| || ||
Sbjct 235891 AAGATATGTTGACCAAGGTGGTGGTAAAAGACCTGGAGCTTTTGCAATTTATCTTGAACC 235832
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
| ||| | ||||| ||||| ||| | || || ||| || || || || || |||
Sbjct 235831 TTGGCATTCTGATATATTTGAATTTATAGATCTTAAGAAGAATACCGGTAAGGAAGAAAA 235772
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
|| || || ||| | || |||||||||||| || |||| |||||||| || || ||
Sbjct 235771 CCGCGCTCGAGATTTATTTTATGCACTTTGGATTCCTGATTTATTTATGAAACGTGTTGA 235712
Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC-CGATGTAT 364042
|| | | ||||||||||| | |||||| || ||||||| || ||| | || || |
Sbjct 235711 AGCTAATGAAAATTGGTCACTTATGTGCCCAAACAAATGTCCTGG-CTTGCATGAGGTTT 235653
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
||||||| || | || | | |||| ||| |||||| ||| || | || ||
Sbjct 235652 GGGGTGAAGAATTTGAAGATTTATATACAAAATATGAAAAGGAAGGTAGAGCAAATAGAG 235593
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| || ||||| || |||||||| || || || | || |||| || ||||| |
Sbjct 235592 TAGTTAAAGCACAAGCTCTTTGGTTTGCTATAATTGAAGCACAAGTTGAAACTGGAACTC 235533
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| |||||| | || || ||||| ||||| ||||| || || || | | || ||||
Sbjct 235532 CTTATATGCTATATAAGGATTCATGCAATCGCAAAAGTAATCAACAAAATTTAGGAACAA 235473
Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
| || || || |||| || || || |||| ||| | || || || || | ||| |
Sbjct 235472 TCAAGTGCAGTAATTTATGCACAGAAATCGTTGAGTACTCTGCGCCAGATGAAATTGCAG 235413
Query 364283 TATGTAACCTTGCGTCGATCGCGCT 364307
| || ||| | || || || || ||
Sbjct 235412 TTTGCAACTTGGCTTCTATAGCACT 235388
>SEQ19926
Length=251428
Score = 158 bits (174), Expect = 3e-33
Identities = 362/535 (68%), Gaps = 24/535 (4%)
Strand=Plus/Plus
Query 111355 TTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAA 111414
|||| || || | ||||||||||| ||| ||| |||| | | ||||| |
Sbjct 63766 TTGTAGAGGAGTTGCTGTGGTTTATAAAAGGATCAACAGATGCGCAGCTA-TTGCAAGAT 63824
Query 111415 AA-AATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTT 111473
|| ||| || | ||||||||||| ||| | || |||| ||| ||||| | ||||| |
Sbjct 63825 AAGAATATACATATTTGGGATGGGAATAGTTCCCGTGCATTTTTAGATAAACTTGGTTTA 63884
Query 111474 GTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGT 111533
||| |||||||| ||| | ||||||||||| || ||||||||||| || || |||
Sbjct 63885 CACGAACGTGAAGAAGGCGATTTAGGACCAGTTTATGGCTTTCAATGGCGTCATTTCGGT 63944
Query 111534 GCAGACTACAAAACCATGCACGACTCAT-ATGATTCACAG-------GGAACTGATCAAT 111585
||||| || | | | || |||| |||||| |||| || | |||||||
Sbjct 63945 GCAGAATATA-----AGGATCG--TCATCATGATT-ACAGCAATGAAGGTATTGATCAAC 63996
Query 111586 TACAGAATGTCATTGATCAAATTAAGAAC-AACCCAACTTCTCGTCGCATTATTATGAGT 111644
| | || || |||||| | || | || || |||| | | | | ||||| ||| |
Sbjct 63997 TTAAAAACGTTATTGAT-ACTATACGTACAAATCCAAATGATAGAAGGATTATAATGTCT 64055
Query 111645 GCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAG 111704
|||||||| ||| || | ||||||||||| |||||||| ||| | | |||
Sbjct 64056 GCATGGAATCCATGTGATATACCTAAAATGGCACTACCACCATGCCATTGTTTAGCTCAG 64115
Query 111705 TTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGT 111764
|||| ||| ||| | | || || ||| | |||||||| ||||||||| |||
Sbjct 64116 TTTTTCGTAGCTAACGATGAGTTATCTTGTCAACTATATCAGCGCAGTGCTGATATGGGT 64175
Query 111765 CTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTA--ATCGCTCATT 111822
||||||||||| ||||||||||| ||| || ||||||| || || || || |||
Sbjct 64176 CTTGGTGTTCCATTTAATATTGCCTCTTATGCTTTACTTAC--GCATATGATTGCGCATG 64233
Query 111823 TTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTA 111877
|||| | || || ||| || | ||| ||| || ||| ||||||| ||
Sbjct 64234 TTACGGGATTAAAGCCTGGTTGTTTTGTACACACTATGGGTGATACGCATGTATA 64288
>SEQ18813
Length=73329
Score = 86.0 bits (94), Expect = 2e-11
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 145531 TTAAATCTTCATCTGAAAATCCAGTTCCGATCTTGCATACACTTTGGAACACTTCTTCGT 145590
|||||||||| || | || || ||||||||||| |||| |||||| | |||| | |
Sbjct 45083 TTAAATCTTCTTCCGTGAAACCTGTTCCGATCTTACATATACTTTGATATTCTTCATTAT 45024
Query 145591 CTGGATCATACACCGCAAGAAGGTATGCACCATATACACCAGTACGTTTTCCGCGACCGG 145650
|| ||||| || || || | | ||||||| ||| || | ||| || ||
Sbjct 45023 CTTTGTCATAACAAGCCAGTAGAAAACCGCCATATATACCCGTTCTTTTGCCTTTGCCCT 44964
Query 145651 TATACCCCGCAATTGGTACAAGATCACAACTATCACCCATTCCGGCAAGATAATCCTTTT 145710
|| | || |||| ||| | ||| | |||||| ||| | |||||||||||||
Sbjct 44963 TAAAGCCACCAATGACTACTAAATCTAAGGAATCACCAGCTCCATCTAGATAATCCTTTT 44904
Query 145711 TAAGTTTTAGCCAATTGAGAGAACGTTTCGATGGTTCATA 145750
| | ||| ||||||||| | |||||||| | | ||||||
Sbjct 44903 TCAATTTAAGCCAATTGCGTGAACGTTTAGCTATTTCATA 44864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302933748261044
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