Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Teleopsis_20dalmanni_20[genbank_20GCA_5F002237135.1_202017-07-28]
25,142 sequences; 621,706,043 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
SEQ18352 95.1 1e-14
>SEQ18352
Length=541547
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||||||||| | || ||||||||||| || | ||| || ||
Sbjct 399694 ATGCAGATATTTGTCAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCTTCG 399753
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | |||||| |||||| || |||||||| | || |||||
Sbjct 399754 GACACAATAGAAAATGTAAAATCTAAAATTCAAGACAAAGAAGGTATACCGCCAGATCAA 399813
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | || || | ||| ||||||||| | ||||||| || | |||| || |||
Sbjct 399814 CAACGTCTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTCTCTCCGACTACAAC 399873
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTT 115497
||||| || || |||||| | ||| |||||||
Sbjct 399874 ATTCAGAAGGAATCTACTTTGCATTTGGTGTT 399905
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || ||||| || | || || ||||||||||| | || ||| ||| |
Sbjct 390753 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATTACTTTAGAGGTCGAG-CCATC 390811
Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| ||| | | || || ||||| |||||||||||| | ||| |||||
Sbjct 390812 TGACACCATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGCATTCCCCCAGATCA 390871
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| | | || | ||| ||||||||| | ||||||| || || |||| || ||
Sbjct 390872 ACAGCGTTTAATCTTTGCTGGCAAACAACTTGAAGATGGTCGTACTTTGTCCGACTACAA 390931
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| ||||| || |||||| ||||| |||| ||| | || || || ||
Sbjct 390932 CATCCAAAAGGAATCTACTTTACATTTGGTATTGCGTTTACGTGGTGG 390979
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| || | || || ||||| || ||| | || ||| ||| |
Sbjct 402202 ATGCAGATTTTTGTCAAGACTTTGACCGGTAAAACTATCACCTTAGAGGTCGAG-CCATC 402260
Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| | | ||| | || ||| || ||| |||||||| ||| | || |||||
Sbjct 402261 TGATAGTATTGAGAATGTTAAAGCTAAGATTCAAGATAAAGAGGGCATTCCTCCAGATCA 402320
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | || |||| ||| ||||||||||| || |||| || | | ||||||||
Sbjct 402321 ACAACGTCTCATTTTTGCTGGCAAACAATTGGAGGATGGTCGCACTTTATCTGATTATAA 402380
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513
||||| || |||||||| | ||| ||||| || | | || ||||||
Sbjct 402381 TATTCAGAAGGAGTCTACACTCCATTTGGTGCTGCGTCTTCGCGGAGGA 402429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425213666889040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |